Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15 141 7e-29 seq3 86.0 5e-12 >seq15 Length=386167 Score = 141 bits (156), Expect = 7e-29 Identities = 570/890 (64%), Gaps = 16/890 (2%) Strand=Plus/Plus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 |||||||| || || || || || | ||| | || ||||||| ||||| ||||| || Sbjct 128539 CGTCGTTTTGTTTTATTTCCAATTAAATATCATGAAATTTGGCAAATGTATAAAAAAGCT 128598 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 |||||||| || ||||| | || || | ||||| ||||| | |||| ||| | Sbjct 128599 GAAGCTTCATTTTGGACTGCAGAAGAAATTGATTTAAGTAAAGATTTACATGATTGGAAT 128658 Query 61171 ---CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCT 61227 |||||| | |||| | ||| ||| | || || || || ||||| ||| Sbjct 128659 AATCGTTTAAATAAAAATGAAAGATTTTTTATTTCAAGAGTTTTAGCATTTTTTGCAGCT 128718 Query 61228 TCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGC-GCAGGAGGTGCAAGTGTC 61286 || || ||||| || ||||| |||||| | ||| ||| | |||| || | ||| | | Sbjct 128719 TCTGATGGTATTGTTAATGAAAATTTAGTTGAAAATTTTTCTGCAGAAGTT-CAAATTCC 128777 Query 61287 GGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA 61346 || || ||||| || || || || ||| ||||| ||| | || || || | || Sbjct 128778 TGAAGCTAAATGTTTTTATGGTTTTCAAATTATGATGGAAAATATTCATTCTGAAACTTA 128837 Query 61347 CAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGC 61406 | | | | ||||| || || | || | ||| | || || || ||||| Sbjct 128838 TTCTTTATTATTAGATACTTATATTAAAGATCCAAAAGAAAATAAATTTTTATTTAATGC 128897 Query 61407 CATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAG 61466 || || || || || | || | ||||| || ||||| || | ||||| | | Sbjct 128898 AATTGAAACAATTCCATGTATTAAACAAAAAGCTGAATGGGCTTTAAGATGGATTA--AT 128955 Query 61467 TACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 | || | ||| || || |||| |||| | || ||||| | || || ||| | || Sbjct 128956 GATAATGATGCTTTATATGCTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATTTTC 129015 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 ||| |||||| ||||| |||| |||||||| || ||| | || | ||||| ||| | Sbjct 129016 TTCTCTGGATCTTTTGCTTCAATATTTTGGTTAAAAAAAAGAGGTTTAATGCCAGGTTTA 129075 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 || || ||||| || || | | || || || | ||| |||||||||| ||| Sbjct 129076 ACATTTTCAAATGAATTAATTTGTAGAGATGAAGGTCTTCATACTGATTTTGCTTGTTTA 129135 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCG--TCGGAGGAGCGTGTGGGTGAGATTGTTC 61702 |||| | || | | ||| || || | ||| | ||| || Sbjct 129136 TTATTTTCTC---ATTTAATTAATAAACCAAATCCATTAAT--TGTTCAAAAAATTATTA 129190 Query 61703 GTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCG 61762 ||| || || ||| ||| | || | | | ||||| ||||| || | || | | | Sbjct 129191 CTGAAGCTGTTGATATTGAAAAAGATTATTTTACTGATGCTTTACCTGCTTCTTTATTAG 129250 Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822 | ||||||||| | |||||| || ||| ||||||||||||| || | | || || | Sbjct 129251 GTATGAATTGTAAATTAATGTGTCAATATGTTGAATTTGTTGCAGATAGATTATTAGTTG 129310 Query 61823 ATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTT 61882 ||| |||| || | |||||| | ||| ||||||||||| ||||| | |||| Sbjct 129311 CTTTAGGTAATAAAAAATTTTATAATGTTACAAATCCATTTGATTTTATGGAAAATATTT 129370 Query 61883 CGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 | | | ||| || || |||||||| || ||| | ||| || |||||| Sbjct 129371 CTTTAGCTGGTAAAACTAATTTTTTTGAAAAAAGAGTATCTGATTATCAA 129420 >seq3 Length=2066014 Score = 86.0 bits (94), Expect = 5e-12 Identities = 339/531 (64%), Gaps = 2/531 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||||| ||| || ||||| || || || | ||| | ||||| ||| || | Sbjct 1414622 CATAAATAAATCCGGGATCCAAAGAGCAGGAAATAAATCTCTTGCTCTAATCTCTTCTTT 1414681 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || |||||||| | | || | || ||||| ||||| |||||||||||||| || || Sbjct 1414682 ACCATGATTTTTTCTAATATCAATAAAATCAAAAATGTCAGCATGCCATGGTTCAAGATA 1414741 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC-GACATTGT 66518 ||| || || | || |||||| |||||||| || || || | || | || | | Sbjct 1414742 GATTGCAAAGGCACCAGGACGTTTATTACCACCTTGATCAACATATCTTGCAGTCA-TAT 1414800 Query 66519 TGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGG 66578 |||| || | ||||| || | | || || || | ||||| || || | || | Sbjct 1414801 TGAATACTCTTAACATTGGGATAATACCATTGGAAGTACCATTAGTACCTGCAATATATG 1414860 Query 66579 ATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGG 66638 | || ||| | |||| |||| || | ||| |||||||| || || || || Sbjct 1414861 AACCGGTTGCTCTGATATTATGAATATGTAAACCTATACCACCAGCATGTTTTGAAATAA 1414920 Query 66639 CAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGA 66698 | || || | || || |||||| || | || || ||| |||| || | | | Sbjct 1414921 CGGCCATTTCAGACAAAGTATCGAATATACCATTTATTGAATCATCCTTCATTGCAACAA 1414980 Query 66699 GGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGT 66758 | | || ||| | ||| || || || || | || ||| | || || | ||| | Sbjct 1414981 GAAAACAAGAAGACATTTGCGGCTTTGGAGTTCCAGCATTGAATAATGTTGGAGAAGCAT 1415040 Query 66759 GCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGC 66818 | || || || | ||||||| |||| || || || | ||| || || || || | Sbjct 1415041 GAGTGAAATATTTTAGAGACATTAAATTATAAGTTTCAAGAACACGCTCGATATTATCAC 1415100 Query 66819 CATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA 66869 ||||||| || | ||| || ||| | | | |||||| | |||| ||| Sbjct 1415101 CATGAATACCAACCGCAACTCTCATAATCAAATGTTGAGGTCTTTCGGCCA 1415151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567655979440