Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq23 154 1e-32 seq12 118 8e-22 >seq23 Length=1356690 Score = 154 bits (170), Expect = 1e-32 Identities = 391/590 (66%), Gaps = 15/590 (3%) Strand=Plus/Plus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 ||||| ||||||| || |||| || ||||| |||| |||||||| ||||| || || Sbjct 990646 TTCGTGATGTTCCCTATTCAGTACGATGATATATGGCAAATGTACAAGAAGGCCGAGGCC 990705 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA-GCGTTT 61175 || |||||||| | |||||| ||||| | || || || ||| |||||| | | Sbjct 990706 TCTTTCTGGACTGCCGAGGAGATCGATCTCTCAAAGGATTTGACCGACTGGAATGACAAG 990765 Query 61176 ATCGAG--CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || | | ||| | | ||||| | ||| ||||| |||||||||||||| || Sbjct 990766 ATGAATGCCAATGAGAGATACTTCATCTCTCGTGTCTTGGCCTTCTTTGCCGCTTCAGAT 990825 Query 61234 GGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGG 61291 ||||| ||| |||||||||| |||| || | || ||||||| | | |||| Sbjct 990826 GGTATTGTCGATGAGAATTTGGCACAGAACTTTATGA--AGCAGGTGCAGTTACCTGAGG 990883 Query 61292 CGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTG 61351 | | ||||| || ||||||||| | ||||| ||||||| |||| || Sbjct 990884 CAAGAGCCTTCTATGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACTTATTCCC 990943 Query 61352 TTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA----TTGTTCAATGCC 61407 || | ||||| || || |||| || | || | | ||| |||||||||||| Sbjct 990944 TTTTGATCGAGACCTATATCACTGACAAG----AAAGAGTCCGACTACTTGTTCAATGCC 990999 Query 61408 ATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT 61467 ||| | || || || | | ||| ||| || ||||| || | ||||| | || | Sbjct 991000 ATCCATACAATTCCACCTATTAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAAT 991059 Query 61468 ACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC 61527 ||| | || ||| ||||| | || ||||| | | || ||||| |||||| Sbjct 991060 GATGATGCTTTGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTC 991119 Query 61528 AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACC 61587 ||||||||||||| | ||||| ||||||||||| | || | ||||| || || || Sbjct 991120 TCTGGATCGTTTGCCTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCTTACG 991179 Query 61588 TTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 ||| || ||| | || | | || ||||| | ||| |||||||| Sbjct 991180 TTCTCTAACGAGCTTATCTGCAGAGATGAGGGTCTACATACCGATTTTGC 991229 >seq12 Length=1432871 Score = 118 bits (130), Expect = 8e-22 Identities = 443/691 (64%), Gaps = 8/691 (1%) Strand=Plus/Plus Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081 ||| || ||| | | ||| || |||| || |||||||||| || ||||| || Sbjct 862744 GTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTC-- 862801 Query 66082 GCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 | || | ||||| ||||| |||| ||||||||||| | ||| || ||||||||||| Sbjct 862802 GAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAG 862861 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199 |||||| | || || || || || || | ||| | || || ||| | | Sbjct 862862 ATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTGA 862921 Query 66200 GCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAG 66259 |||||||| || | | | | |||| |||||| | ||| | | ||||| Sbjct 862922 GCCTTCACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAAC 862981 Query 66260 GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCA 66319 ||||| | || || || |||| ||| || ||| | | || | ||| | Sbjct 862982 TCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTG 863041 Query 66320 CCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 | | || ||| ||||| |||||||| ||| || ||||| || || || | || Sbjct 863042 TCGT--TGCTCTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAAT 863099 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | ||||| || |||||| | || ||||| || | | |||| || || ||||| | Sbjct 863100 CACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATAT 863159 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 | |||||||| || |||| ||| || || | | || | ||| |||||||| | Sbjct 863160 CAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGAT 863219 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 | || || | ||| | ||||||| ||||| | |||||| | | ||||| ||| | | Sbjct 863220 CCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTAC 863279 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617 |||| || ||| | || || || | || || | ||||| | |||||||||| Sbjct 863280 CATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATAC 863339 Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGG 66677 |||| || ||||| || || |||||| | || || | | || || ||||| | Sbjct 863340 CACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAG 863399 Query 66678 AGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708 ||||| | || || | | | | ||||||| Sbjct 863400 AGTCATCTTTCATTGCAACTAAGAAGCATGA 863430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567854639200