Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq23 154 1e-32
seq12 118 8e-22
>seq23
Length=1356690
Score = 154 bits (170), Expect = 1e-32
Identities = 391/590 (66%), Gaps = 15/590 (3%)
Strand=Plus/Plus
Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116
||||| ||||||| || |||| || ||||| |||| |||||||| ||||| || ||
Sbjct 990646 TTCGTGATGTTCCCTATTCAGTACGATGATATATGGCAAATGTACAAGAAGGCCGAGGCC 990705
Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA-GCGTTT 61175
|| |||||||| | |||||| ||||| | || || || ||| |||||| | |
Sbjct 990706 TCTTTCTGGACTGCCGAGGAGATCGATCTCTCAAAGGATTTGACCGACTGGAATGACAAG 990765
Query 61176 ATCGAG--CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233
|| | | ||| | | ||||| | ||| ||||| |||||||||||||| ||
Sbjct 990766 ATGAATGCCAATGAGAGATACTTCATCTCTCGTGTCTTGGCCTTCTTTGCCGCTTCAGAT 990825
Query 61234 GGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGG 61291
||||| ||| |||||||||| |||| || | || ||||||| | | ||||
Sbjct 990826 GGTATTGTCGATGAGAATTTGGCACAGAACTTTATGA--AGCAGGTGCAGTTACCTGAGG 990883
Query 61292 CGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTG 61351
| | ||||| || ||||||||| | ||||| ||||||| |||| ||
Sbjct 990884 CAAGAGCCTTCTATGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACTTATTCCC 990943
Query 61352 TTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA----TTGTTCAATGCC 61407
|| | ||||| || || |||| || | || | | ||| ||||||||||||
Sbjct 990944 TTTTGATCGAGACCTATATCACTGACAAG----AAAGAGTCCGACTACTTGTTCAATGCC 990999
Query 61408 ATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT 61467
||| | || || || | | ||| ||| || ||||| || | ||||| | || |
Sbjct 991000 ATCCATACAATTCCACCTATTAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAAT 991059
Query 61468 ACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC 61527
||| | || ||| ||||| | || ||||| | | || ||||| ||||||
Sbjct 991060 GATGATGCTTTGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTC 991119
Query 61528 AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACC 61587
||||||||||||| | ||||| ||||||||||| | || | ||||| || || ||
Sbjct 991120 TCTGGATCGTTTGCCTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCTTACG 991179
Query 61588 TTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637
||| || ||| | || | | || ||||| | ||| ||||||||
Sbjct 991180 TTCTCTAACGAGCTTATCTGCAGAGATGAGGGTCTACATACCGATTTTGC 991229
>seq12
Length=1432871
Score = 118 bits (130), Expect = 8e-22
Identities = 443/691 (64%), Gaps = 8/691 (1%)
Strand=Plus/Plus
Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081
||| || ||| | | ||| || |||| || |||||||||| || ||||| ||
Sbjct 862744 GTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTC-- 862801
Query 66082 GCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
| || | ||||| ||||| |||| ||||||||||| | ||| || |||||||||||
Sbjct 862802 GAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAG 862861
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
|||||| | || || || || || || | ||| | || || ||| | |
Sbjct 862862 ATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTGA 862921
Query 66200 GCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAG 66259
|||||||| || | | | | |||| |||||| | ||| | | |||||
Sbjct 862922 GCCTTCACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAAC 862981
Query 66260 GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCA 66319
||||| | || || || |||| ||| || ||| | | || | ||| |
Sbjct 862982 TCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTG 863041
Query 66320 CCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377
| | || ||| ||||| |||||||| ||| || ||||| || || || | ||
Sbjct 863042 TCGT--TGCTCTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAAT 863099
Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437
| ||||| || |||||| | || ||||| || | | |||| || || ||||| |
Sbjct 863100 CACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATAT 863159
Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497
| |||||||| || |||| ||| || || | | || | ||| |||||||| |
Sbjct 863160 CAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGAT 863219
Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557
| || || | ||| | ||||||| ||||| | |||||| | | ||||| ||| | |
Sbjct 863220 CCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTAC 863279
Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617
|||| || ||| | || || || | || || | ||||| | ||||||||||
Sbjct 863280 CATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATAC 863339
Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGG 66677
|||| || ||||| || || |||||| | || || | | || || ||||| |
Sbjct 863340 CACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAG 863399
Query 66678 AGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708
||||| | || || | | | | |||||||
Sbjct 863400 AGTCATCTTTCATTGCAACTAAGAAGCATGA 863430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567854639200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |