Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq25 120 1e-21 >seq25 Length=1112461 Score = 120 bits (132), Expect = 1e-21 Identities = 278/413 (67%), Gaps = 12/413 (3%) Strand=Plus/Minus Query 12638 GTATCTGGAACGTGCAAGGTTACAAAGTCGGAACGAGACAAGAGACCTTGCAGAGTAGAC 12697 || ||||| |||||||| || |||||||| || | ||| | | | || |||| Sbjct 604627 GTCTCTGGGACGTGCAAAGTGACAAAGTCAGACTCACTCAAAACCTCATCCAAGGTAGTG 604568 Query 12698 ACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACAT--CGTAAAAGAAAACTTTCA 12755 ||||||| | ||| || |||| | | ||| || || |||| ||| || || Sbjct 604567 ACTTGCTCAGAGTTACCGAGAGCCA--TCAATGACAAGATATCGTAGTAGAGCACACGCA 604510 Query 12756 TGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACCTACTATAC 12815 | || | | || || || ||||| | |||||||||||||| |||||| || || |||| Sbjct 604509 TACCCAAAGCTTCGGCCAGAACAGACAACTGAGAACCAATGTGACCATATCCGACAATAC 604450 Query 12816 CTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAG---TCTTGTTCCAAATGCCTT 12872 ||| ||||| ||||||||||| | ||| || || || |||||||||| | |||| Sbjct 604449 CTAAAGTCTTACCTCTAACTTCCCAGCA---TTTAGCAGACTTCTTGTTCCAGACACCTT 604393 Query 12873 GGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTT-GTCCTATG 12931 |||| | ||| | | |||||||| ||||||||| | | | || | || || ||| Sbjct 604392 GGTGCATTTCCATAACACGATCTCCAAGCTGACGAGACAAACTGATAACTTCAGCCAATG 604333 Query 12932 ATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGCCTAGT 12991 | | ||| || || | | ||| || || || ||||| || || || || | Sbjct 604332 -TCATCTCAGCAACTGAGCGCGAGTTACAGAATGGTGAATTGAACACACAGATACCGTGA 604274 Query 12992 TTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCATCCTAT 13044 | | ||| ||||||| |||||| | | ||| || ||||||||||| || Sbjct 604273 TCCGCAGCATACTCTAGATCAACCTGGTTGGTACCGATACAGAAGCATCCGAT 604221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885675496790