Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq11 370 2e-100 >seq11 Length=7828 Score = 370 bits (410), Expect = 2e-100 Identities = 272/312 (87%), Gaps = 16/312 (5%) Strand=Plus/Plus Query 9 CCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCA 68 ||| ||| |||||||||||||| | ||| ||||| |||||| || ||| Sbjct 3538 CCGCCCGAGCCTTTCCTTCTGGCTAG--GCA---CCTTC---GGGTGTT-----GAACCA 3584 Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGC 128 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 3585 GGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAGATTAGC 3644 Query 129 ATGGAATAATAGAATAGGACGTGC--GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 3645 ATGGAATAATAGAATAGGACGTTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAA 3704 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| Sbjct 3705 TGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGAT 3764 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||| ||||||||||||||||||||||| || ||||||| |||||||||||||| |||| Sbjct 3765 TTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAAC 3823 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 3824 GAAAGTTAGGGG 3835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199743744