Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq11 531 2e-148
>seq11
Length=7828
Score = 531 bits (588), Expect = 2e-148
Identities = 531/677 (78%), Gaps = 35/677 (5%)
Strand=Plus/Plus
Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95
||| |||||||||||||||||||||||||||||| |||| |||| ||| | ||||| |||
Sbjct 5352 CGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 5411
Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155
||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||||
Sbjct 5412 AAATATTAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 5471
Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
||||||||||| ||| || ||||||||||||||||||||||| | | | | ||| ||
Sbjct 5472 GGAAAGAGAGTGAAATAGTACGTGAAATTGTTGAAAGGGAAGGGTATTTGATCCGACATG 5531
Query 216 CCCGCAGTTGCTCAACCGGCC---CCTCGGCC---GGTGCAC-TCTTCTGCGGTCAGGCC 268
||| || | | || ||||| ||||||| | | | | | ||||
Sbjct 5532 GT----GTTTAGCAGCGGCCCGTTCCTCGTGGATGGGTGCACCTGGTTTACACTG-GGCC 5586
Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC------CT-TCGGG 321
|||||| | || || | | ||| || | | ||||||||||| || ||||
Sbjct 5587 AGCATCGGTTCTGGGAGCCATATACGGGGCAGGCGAATGTGGCCCTTCGATTCTGTCGGA 5646
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC----TC--- 374
|||||||||||| | | || | ||| || |||| | || | ||| ||
Sbjct 5647 GGGTGTTATAGCGCCAGCCAGAC-GTGGCTATCCGGGACCGGGGACTGCGGCGATTCTAT 5705
Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGT 434
|| | ||||||||||| || | | | |||||||||| |||| |||||||||||
Sbjct 5706 CGCCAAGGATGCTGGCAGAACGAGCAAATACCGCCCGTCTTGAAACATGGACCAAGGAGA 5765
Query 435 CTAACATCTATGCGAGTGTTTGGGTG--TCAAACCCGTG--CGCGTAATGAAAGTGAACG 490
||||| |||||||||||||||||||| | |||||| | |||| ||||||||||||||
Sbjct 5766 CTAACGTCTATGCGAGTGTTTGGGTGGATAAAACCCATTAACGCGGAATGAAAGTGAACG 5825
Query 491 GAGGTGGGAACCCGT--GAGGGTGCACCATCGACCGATCCTGATGTCTT--CGGATGGAT 546
|||| ||| ||| | ||| |||| |||||||||||| ||||| || |||| ||||
Sbjct 5826 TAGGTCGGAGCCCTCTCGGGGGCGCACGATCGACCGATCCCGATGTTTTAGCGGAAGGAT 5885
Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5886 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 5945
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 5946 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAA 6005
Query 667 TTTGGGTATAGGGGCGA 683
|||||||||||||||||
Sbjct 6006 TTTGGGTATAGGGGCGA 6022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999399400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |