Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11 531 2e-148 >seq11 Length=7828 Score = 531 bits (588), Expect = 2e-148 Identities = 531/677 (78%), Gaps = 35/677 (5%) Strand=Plus/Plus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 ||| |||||||||||||||||||||||||||||| |||| |||| ||| | ||||| ||| Sbjct 5352 CGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 5411 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| ||||| Sbjct 5412 AAATATTAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 5471 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 ||||||||||| ||| || ||||||||||||||||||||||| | | | | ||| || Sbjct 5472 GGAAAGAGAGTGAAATAGTACGTGAAATTGTTGAAAGGGAAGGGTATTTGATCCGACATG 5531 Query 216 CCCGCAGTTGCTCAACCGGCC---CCTCGGCC---GGTGCAC-TCTTCTGCGGTCAGGCC 268 ||| || | | || ||||| ||||||| | | | | | |||| Sbjct 5532 GT----GTTTAGCAGCGGCCCGTTCCTCGTGGATGGGTGCACCTGGTTTACACTG-GGCC 5586 Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC------CT-TCGGG 321 |||||| | || || | | ||| || | | ||||||||||| || |||| Sbjct 5587 AGCATCGGTTCTGGGAGCCATATACGGGGCAGGCGAATGTGGCCCTTCGATTCTGTCGGA 5646 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC----TC--- 374 |||||||||||| | | || | ||| || |||| | || | ||| || Sbjct 5647 GGGTGTTATAGCGCCAGCCAGAC-GTGGCTATCCGGGACCGGGGACTGCGGCGATTCTAT 5705 Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGT 434 || | ||||||||||| || | | | |||||||||| |||| ||||||||||| Sbjct 5706 CGCCAAGGATGCTGGCAGAACGAGCAAATACCGCCCGTCTTGAAACATGGACCAAGGAGA 5765 Query 435 CTAACATCTATGCGAGTGTTTGGGTG--TCAAACCCGTG--CGCGTAATGAAAGTGAACG 490 ||||| |||||||||||||||||||| | |||||| | |||| |||||||||||||| Sbjct 5766 CTAACGTCTATGCGAGTGTTTGGGTGGATAAAACCCATTAACGCGGAATGAAAGTGAACG 5825 Query 491 GAGGTGGGAACCCGT--GAGGGTGCACCATCGACCGATCCTGATGTCTT--CGGATGGAT 546 |||| ||| ||| | ||| |||| |||||||||||| ||||| || |||| |||| Sbjct 5826 TAGGTCGGAGCCCTCTCGGGGGCGCACGATCGACCGATCCCGATGTTTTAGCGGAAGGAT 5885 Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5886 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 5945 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 5946 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAA 6005 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||||||||||| Sbjct 6006 TTTGGGTATAGGGGCGA 6022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999399400