Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11 381 1e-103 >seq11 Length=7828 Score = 381 bits (422), Expect = 1e-103 Identities = 277/315 (88%), Gaps = 8/315 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC---TTTGGCGGGTCGC-CGGCTTC 75 || ||||||||||||||||||||||| ||| || ||| || || | |||| Sbjct 4176 GAACGAGACCTTAACCTGCTAAATAGTGGAGCCAGCGACTTTAGCTGGAGATTCCACTTC 4235 Query 76 TTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 4236 TTAGAGGGACCATCGGTGTCAAGCCGAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 4295 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA-CCT 193 ||||||| ||||||||||||||||||||||||||||| |||||| ||||| || | ||| Sbjct 4296 CCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT--ATTAGCCT 4353 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| || Sbjct 4354 TGGCCGAGAGGTCTGGGTAATCTTGAGAAACTCCGTCGTGCTGGGGATAGAGCATTGGAA 4413 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| Sbjct 4414 TTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACG 4473 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 4474 TCCCTGCCCTTTGTA 4488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199734784