Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq11 724 0.0 >seq11 Length=7828 Score = 724 bits (802), Expect = 0.0 Identities = 486/535 (91%), Gaps = 13/535 (2%) Strand=Plus/Minus Query 17 ACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGA 76 || |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 7827 ACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATCTTTTAACAGA 7768 Query 77 TGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC---GGCCCGC 133 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | Sbjct 7767 TGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCAACGGCACAA 7708 Query 134 GAAGGAC--CTT--AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTA 189 |||| | ||| || |||||| ||| || |||| ||||||| ||||| || Sbjct 7707 -AAGGCCGCCTTTCAATTCCAGAACGTGGATCTTGCGATCCAGCTCCGCTTAATTGAATA 7649 Query 190 AGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTC 249 |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| Sbjct 7648 AGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTATTC 7592 Query 250 TACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 |||||| ||| | ||| |||||||| ||| ||||||||||||||||||||||||||||| Sbjct 7591 TACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTT 7533 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7532 TCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 7473 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 7472 GACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATGACGAGGCATTTG 7413 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 7412 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCGTTGAATTTCTTC 7353 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7352 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 7298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199542144