Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq11 706 0.0 >seq11 Length=7828 Score = 706 bits (782), Expect = 0.0 Identities = 462/507 (91%), Gaps = 4/507 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| ||| |||||||||||||| Sbjct 3374 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATATATTGTCACTACCT 3315 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3314 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 3255 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 3254 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTAAAAACCATGGTA 3195 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||| | || || Sbjct 3194 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCTCCAGCA 3135 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||| | |||| |||||||||||| ||| ||| || |||||| || ||| | Sbjct 3134 CAAGGCCATGAGCTTCGAGAAGTTATTATGATTCATCAAACGGCTCCGAAGAGCATTGAT 3075 Query 301 TTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 |||||||||||||||||||||||| || |||||||||||| ||||||||||| Sbjct 3074 TTTTTATCTAATAAATACACCCCTCCCATAACAGTCGGGGTTTTAGTCATGTATTAGCCA 3015 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 3014 CAGAATTACCACGGTTATCCATGTAGTAATGAACTATCAAATAAACGATAACTGATTTAA 2955 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2954 TGAGCCATTCGCAGTTTCACTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCT 2896 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 2895 TTGAGACAAGCATATGACTACTGGCAG 2869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399577088