Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq23 154 1e-32 seq12 118 8e-22 >seq23 Length=1344041 Score = 154 bits (170), Expect = 1e-32 Identities = 391/590 (66%), Gaps = 15/590 (3%) Strand=Plus/Plus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 ||||| ||||||| || |||| || ||||| |||| |||||||| ||||| || || Sbjct 977616 TTCGTGATGTTCCCTATTCAGTACGATGATATATGGCAAATGTACAAGAAGGCCGAGGCC 977675 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA-GCGTTT 61175 || |||||||| | |||||| ||||| | || || || ||| |||||| | | Sbjct 977676 TCTTTCTGGACTGCCGAGGAGATCGATCTCTCAAAGGATTTGACCGACTGGAATGACAAG 977735 Query 61176 ATCGAG--CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || | | ||| | | ||||| | ||| ||||| |||||||||||||| || Sbjct 977736 ATGAATGCCAATGAGAGATACTTCATCTCTCGTGTCTTGGCCTTCTTTGCCGCTTCAGAT 977795 Query 61234 GGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGG 61291 ||||| ||| |||||||||| |||| || | || ||||||| | | |||| Sbjct 977796 GGTATTGTCGATGAGAATTTGGCACAGAACTTTATGA--AGCAGGTGCAGTTACCTGAGG 977853 Query 61292 CGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTG 61351 | | ||||| || ||||||||| | ||||| ||||||| |||| || Sbjct 977854 CAAGAGCCTTCTATGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACTTATTCCC 977913 Query 61352 TTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA----TTGTTCAATGCC 61407 || | ||||| || || |||| || | || | | ||| |||||||||||| Sbjct 977914 TTTTGATCGAGACCTATATCACTGACAAG----AAAGAGTCCGACTACTTGTTCAATGCC 977969 Query 61408 ATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT 61467 ||| | || || || | | ||| ||| || ||||| || | ||||| | || | Sbjct 977970 ATCCATACAATTCCACCTATTAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAAT 978029 Query 61468 ACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC 61527 ||| | || ||| ||||| | || ||||| | | || ||||| |||||| Sbjct 978030 GATGATGCTTTGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTC 978089 Query 61528 AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACC 61587 ||||||||||||| | ||||| ||||||||||| | || | ||||| || || || Sbjct 978090 TCTGGATCGTTTGCCTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCTTACG 978149 Query 61588 TTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 ||| || ||| | || | | || ||||| | ||| |||||||| Sbjct 978150 TTCTCTAACGAGCTTATCTGCAGAGATGAGGGTCTACATACCGATTTTGC 978199 >seq12 Length=1682134 Score = 118 bits (130), Expect = 8e-22 Identities = 443/691 (64%), Gaps = 8/691 (1%) Strand=Plus/Plus Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081 ||| || ||| | | ||| || |||| || |||||||||| || ||||| || Sbjct 1115779 GTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTC-- 1115836 Query 66082 GCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 | || | ||||| ||||| |||| ||||||||||| | ||| || ||||||||||| Sbjct 1115837 GAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAG 1115896 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199 |||||| | || || || || || || | ||| | || || ||| | | Sbjct 1115897 ATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTGA 1115956 Query 66200 GCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAG 66259 |||||||| || | | | | |||| |||||| | ||| | | ||||| Sbjct 1115957 GCCTTCACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAAC 1116016 Query 66260 GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCA 66319 ||||| | || || || |||| ||| || ||| | | || | ||| | Sbjct 1116017 TCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTG 1116076 Query 66320 CCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 | | || ||| ||||| |||||||| ||| || ||||| || || || | || Sbjct 1116077 TCGT--TGCTCTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAAT 1116134 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | ||||| || |||||| | || ||||| || | | |||| || || ||||| | Sbjct 1116135 CACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATAT 1116194 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 | |||||||| || |||| ||| || || | | || | ||| |||||||| | Sbjct 1116195 CAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGAT 1116254 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 | || || | ||| | ||||||| ||||| | |||||| | | ||||| ||| | | Sbjct 1116255 CCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTAC 1116314 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617 |||| || ||| | || || || | || || | ||||| | |||||||||| Sbjct 1116315 CATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATAC 1116374 Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGG 66677 |||| || ||||| || || |||||| | || || | | || || ||||| | Sbjct 1116375 CACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAG 1116434 Query 66678 AGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708 ||||| | || || | | | | ||||||| Sbjct 1116435 AGTCATCTTTCATTGCAACTAAGAAGCATGA 1116465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567864329920