Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq24 120 1e-21
>seq24
Length=1088928
Score = 120 bits (132), Expect = 1e-21
Identities = 278/413 (67%), Gaps = 12/413 (3%)
Strand=Plus/Minus
Query 12638 GTATCTGGAACGTGCAAGGTTACAAAGTCGGAACGAGACAAGAGACCTTGCAGAGTAGAC 12697
|| ||||| |||||||| || |||||||| || | ||| | | | || ||||
Sbjct 583360 GTCTCTGGGACGTGCAAAGTGACAAAGTCAGACTCACTCAAAACCTCATCCAAGGTAGTG 583301
Query 12698 ACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACAT--CGTAAAAGAAAACTTTCA 12755
||||||| | ||| || |||| | | ||| || || |||| ||| || ||
Sbjct 583300 ACTTGCTCAGAGTTACCGAGAGCCA--TCAATGACAAGATATCGTAGTAGAGCACACGCA 583243
Query 12756 TGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACCTACTATAC 12815
| || | | || || || ||||| | |||||||||||||| |||||| || || ||||
Sbjct 583242 TACCCAAAGCTTCGGCCAGAACAGACAACTGAGAACCAATGTGACCATATCCGACAATAC 583183
Query 12816 CTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAG---TCTTGTTCCAAATGCCTT 12872
||| ||||| ||||||||||| | ||| || || || |||||||||| | ||||
Sbjct 583182 CTAAAGTCTTACCTCTAACTTCCCAGCA---TTTAGCAGACTTCTTGTTCCAGACACCTT 583126
Query 12873 GGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTT-GTCCTATG 12931
|||| | ||| | | |||||||| ||||||||| | | | || | || || |||
Sbjct 583125 GGTGCATTTCCATAACACGATCTCCAAGCTGACGAGACAAACTGATAACTTCAGCCAATG 583066
Query 12932 ATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGCCTAGT 12991
| | ||| || || | | ||| || || || ||||| || || || || |
Sbjct 583065 -TCATCTCAGCAACTGAGCGCGAGTTACAGAATGGTGAATTGAACACACAGATACCGTGA 583007
Query 12992 TTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCATCCTAT 13044
| | ||| ||||||| |||||| | | ||| || ||||||||||| ||
Sbjct 583006 TCCGCAGCATACTCTAGATCAACCTGGTTGGTACCGATACAGAAGCATCCGAT 582954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885723797004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |