Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq228 533 6e-149 >seq228 Length=9725 Score = 533 bits (590), Expect = 6e-149 Identities = 530/676 (78%), Gaps = 34/676 (5%) Strand=Plus/Minus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 ||| |||||||||||||||||||||||||||||| |||| |||| ||| | ||||| ||| Sbjct 5501 CGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 5442 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| ||||| Sbjct 5441 AAATATTAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 5382 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 ||||||||||| ||| || ||||||||||||||||||||||| | | | | ||| || Sbjct 5381 GGAAAGAGAGTGAAATAGTACGTGAAATTGTTGAAAGGGAAGGGTATTTGATCCGACATG 5322 Query 216 CCCGCAGTTGCTCAACCGGCC---CCTCGGCC---GGTGCAC-TCTTCTGCGGTCAGGCC 268 ||| || | | || ||||| ||||||| | | | | | |||| Sbjct 5321 GT----GTTTAGCAGCGGCCCGTTCCTCGTGGATGGGTGCACCTGGTTTACACTG-GGCC 5267 Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC------CT-TCGGG 321 |||||| | || || | | ||| || || ||||||||||| || |||| Sbjct 5266 AGCATCGGTTCTGGGAGCCATATACGGGGTTCGTGAATGTGGCCCTTCGATTCTGTCGGA 5207 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTC------C 375 |||||||||||| ||| || ||| ||| |||| | || | ||| | | Sbjct 5206 GGGTGTTATAGCGCGGACATCT-TGTGGCTAGCCGGGACCGGGGACTGCGGTGACTTGTC 5148 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | ||||||||||| || | | | ||||||||| |||| ||||||||||| | Sbjct 5147 ACCAAGGATGCTGGCAGAACGAGCAAATACCACCCGTCTTGAAACATGGACCAAGGAGAC 5088 Query 436 TAACATCTATGCGAGTGTTTGGGTG--TCAAACCCGTG--CGCGTAATGAAAGTGAACGG 491 |||| |||||||||||||||||||| | |||||| | |||| |||||||||||||| Sbjct 5087 TAACGTCTATGCGAGTGTTTGGGTGGATAAAACCCATTAACGCGGAATGAAAGTGAACGT 5028 Query 492 AGGTGGGAACCCG--TGAGGGTGCACCATCGACCGATCCTGATGTCTT--CGGATGGATT 547 |||| ||| ||| || ||| |||| |||||||||||| ||||| || |||| ||||| Sbjct 5027 AGGTCGGAGCCCCCTTGGGGGCGCACGATCGACCGATCCCGATGTTTTACCGGAGGGATT 4968 Query 548 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4967 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 4908 Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 4907 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAAT 4848 Query 668 TTGGGTATAGGGGCGA 683 |||||||||||||||| Sbjct 4847 TTGGGTATAGGGGCGA 4832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079979021900