Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq228 533 6e-149
>seq228
Length=9725
Score = 533 bits (590), Expect = 6e-149
Identities = 530/676 (78%), Gaps = 34/676 (5%)
Strand=Plus/Minus
Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95
||| |||||||||||||||||||||||||||||| |||| |||| ||| | ||||| |||
Sbjct 5501 CGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 5442
Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155
||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||||
Sbjct 5441 AAATATTAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 5382
Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
||||||||||| ||| || ||||||||||||||||||||||| | | | | ||| ||
Sbjct 5381 GGAAAGAGAGTGAAATAGTACGTGAAATTGTTGAAAGGGAAGGGTATTTGATCCGACATG 5322
Query 216 CCCGCAGTTGCTCAACCGGCC---CCTCGGCC---GGTGCAC-TCTTCTGCGGTCAGGCC 268
||| || | | || ||||| ||||||| | | | | | ||||
Sbjct 5321 GT----GTTTAGCAGCGGCCCGTTCCTCGTGGATGGGTGCACCTGGTTTACACTG-GGCC 5267
Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC------CT-TCGGG 321
|||||| | || || | | ||| || || ||||||||||| || ||||
Sbjct 5266 AGCATCGGTTCTGGGAGCCATATACGGGGTTCGTGAATGTGGCCCTTCGATTCTGTCGGA 5207
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTC------C 375
|||||||||||| ||| || ||| ||| |||| | || | ||| | |
Sbjct 5206 GGGTGTTATAGCGCGGACATCT-TGTGGCTAGCCGGGACCGGGGACTGCGGTGACTTGTC 5148
Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435
| ||||||||||| || | | | ||||||||| |||| ||||||||||| |
Sbjct 5147 ACCAAGGATGCTGGCAGAACGAGCAAATACCACCCGTCTTGAAACATGGACCAAGGAGAC 5088
Query 436 TAACATCTATGCGAGTGTTTGGGTG--TCAAACCCGTG--CGCGTAATGAAAGTGAACGG 491
|||| |||||||||||||||||||| | |||||| | |||| ||||||||||||||
Sbjct 5087 TAACGTCTATGCGAGTGTTTGGGTGGATAAAACCCATTAACGCGGAATGAAAGTGAACGT 5028
Query 492 AGGTGGGAACCCG--TGAGGGTGCACCATCGACCGATCCTGATGTCTT--CGGATGGATT 547
|||| ||| ||| || ||| |||| |||||||||||| ||||| || |||| |||||
Sbjct 5027 AGGTCGGAGCCCCCTTGGGGGCGCACGATCGACCGATCCCGATGTTTTACCGGAGGGATT 4968
Query 548 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4967 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 4908
Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 4907 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAAT 4848
Query 668 TTGGGTATAGGGGCGA 683
||||||||||||||||
Sbjct 4847 TTGGGTATAGGGGCGA 4832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079979021900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |