Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq228 342 8e-92 >seq228 Length=9725 Score = 342 bits (378), Expect = 8e-92 Identities = 234/262 (89%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 6440 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 6499 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AG 119 ||||||||||||||||||||||| | |||| || || || |||||||||||||| | Sbjct 6500 ACCTGTTATTGCCTCAAACTTCCTTCGGCTTGACACCGATGGTCCCTCTAAGAAGTGGAT 6559 Query 120 CCACCAACCATAGTCGATGGGGC---TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 || ||| | | ||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct 6560 CCTCCAGCTAAAGTCGCTGGCTCCACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCA 6619 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 6620 ATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATC 6679 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||||||| Sbjct 6680 AAGAAAGAGCTCTCAATCTGTC 6701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796792450818