Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq228 387 3e-105 >seq228 Length=9725 Score = 387 bits (428), Expect = 3e-105 Identities = 277/314 (88%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC---TTTGGCGGGTCGC-CGGCTTC 75 || ||||||||||||||||||||||| ||| || ||| || || | | |||| Sbjct 6610 GAACGAGACCTTAACCTGCTAAATAGTGGAGCCAGCGACTTTAGCTGGAGGATCCACTTC 6551 Query 76 TTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 6550 TTAGAGGGACCATCGGTGTCAAGCCGAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 6491 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 ||||||| ||||||||||||||||||||||||||||| |||||| ||||| || |||| Sbjct 6490 CCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTA-ATAGCCTT 6432 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| ||| Sbjct 6431 GGCCGAGAGGTCTGGGTAATCTTGAGAAACTCCGTCGTGCTGGGGATAGAGCATTGGAAT 6372 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 ||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| Sbjct 6371 TATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGT 6312 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 6311 CCCTGCCCTTTGTA 6298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947190736384