Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq228 731 0.0 >seq228 Length=9725 Score = 731 bits (810), Expect = 0.0 Identities = 493/544 (91%), Gaps = 13/544 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3018 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 3077 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3078 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 3137 Query 127 ---GGCCC-GCGAAGGACCTT--AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTT 180 |||| | | | |||| || |||||| ||| || |||| ||||||| Sbjct 3138 AACGGCCTAGTGCCG--CCTTTCAATTCCAGAACGTGGATCTTGCGATCCAGCTCCGCTT 3195 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCC 240 ||||| |||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct 3196 AATTGAATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCC 3252 Query 241 CACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 ||||||||||||| ||||| | ||| |||||||| ||| |||||||||||||||||||| Sbjct 3253 CACTTATTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAG 3311 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3312 GGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 3371 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 3372 GTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATGACG 3431 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3432 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCGTTG 3491 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTT 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3492 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTT 3551 Query 540 TCTG 543 |||| Sbjct 3552 TCTG 3555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635184007744