Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq228 147 4e-33
>seq228
Length=9725
Score = 147 bits (162), Expect = 4e-33
Identities = 218/301 (72%), Gaps = 25/301 (8%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| | |||||| ||||||||| |||| | |||| |
Sbjct 2693 GTACGAGAGGAACCGTTCA-TTCAGA-TCATTGGTAATTGCGGCTGCCTGAGCGGGCACT 2636
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 2635 ACCGCGAAGCTATCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2576
Query 121 GA-ACGGGGTGATT-------CTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC---- 167
|| | ||| ||||| | | ||| | ||| |||||||||| ||||
Sbjct 2575 GACAGGGGATGATTAATTTTAGTGCCTTGCTGTTACTAGAAGGATACGAATAAGGCGGTA 2516
Query 168 --TT-----CGGCCCCGA-ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGG 218
|| || | | || ||| || ||||| ||| | ||| || |||||| || |
Sbjct 2515 CATTAGTGCCGTCGCTGAGACCATATCAGGCGGGCGATGGGATACCAGGCGGAAAGGCCG 2456
Query 219 GGCGCTC-AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGA 277
|| | || | |||||| ||||| ||| | ||| ||| | |||||||||||||||
Sbjct 2455 GGTGTTCTTGTCTGCGGATAGCAATGTCAAGAGTGGCAAGGAGAGATCCTTTGCAGACGA 2396
Query 278 C 278
|
Sbjct 2395 C 2395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192238592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |