Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq228 147 4e-33 >seq228 Length=9725 Score = 147 bits (162), Expect = 4e-33 Identities = 218/301 (72%), Gaps = 25/301 (8%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| | |||||| ||||||||| |||| | |||| | Sbjct 2693 GTACGAGAGGAACCGTTCA-TTCAGA-TCATTGGTAATTGCGGCTGCCTGAGCGGGCACT 2636 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 2635 ACCGCGAAGCTATCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2576 Query 121 GA-ACGGGGTGATT-------CTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC---- 167 || | ||| ||||| | | ||| | ||| |||||||||| |||| Sbjct 2575 GACAGGGGATGATTAATTTTAGTGCCTTGCTGTTACTAGAAGGATACGAATAAGGCGGTA 2516 Query 168 --TT-----CGGCCCCGA-ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGG 218 || || | | || ||| || ||||| ||| | ||| || |||||| || | Sbjct 2515 CATTAGTGCCGTCGCTGAGACCATATCAGGCGGGCGATGGGATACCAGGCGGAAAGGCCG 2456 Query 219 GGCGCTC-AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGA 277 || | || | |||||| ||||| ||| | ||| ||| | ||||||||||||||| Sbjct 2455 GGTGTTCTTGTCTGCGGATAGCAATGTCAAGAGTGGCAAGGAGAGATCCTTTGCAGACGA 2396 Query 278 C 278 | Sbjct 2395 C 2395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192238592