Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq228 702 0.0
seq233 237 5e-60
>seq228
Length=9725
Score = 702 bits (778), Expect = 0.0
Identities = 461/507 (91%), Gaps = 4/507 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| | | |||||||||| ||| ||||||||||||||
Sbjct 7412 GTACTCATTCCAATTACAAGACCCGTATGGGCCCTGTATCGTTATATATTGTCACTACCT 7471
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7472 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 7531
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 7532 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTAAAAACCATGGTA 7591
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 7592 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCTCCAGCA 7651
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||| | |||| |||||||||||| ||| ||| || |||||| || ||| |
Sbjct 7652 CAAGGCCATGAGCTTCGAGAAGTTATTATGATTCATCAAACGGCTCCGAAGAGCATTGAT 7711
Query 301 TTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357
|||||||||||||||||||||||| || |||||||||||| |||||||||||
Sbjct 7712 TTTTTATCTAATAAATACACCCCTCCCATAACAGTCGGGGTTTTAGTCATGTATTAGCCA 7771
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 7772 CAGAATTACCACGGTTATCCATGTAGTAATGAACTATCAAATAAACGATAACTGATTTAA 7831
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 7832 TGAGCCATTCGCAGTTTCACTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCT 7890
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 7891 TTGAGACAAGCATATGACTACTGGCAG 7917
>seq233
Length=9538
Score = 237 bits (262), Expect = 5e-60
Identities = 138/141 (98%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 364 TACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCC 423
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 7736 TACCACGGTTATCCATGTAGTAATGAACTATCAAATAAACGATAACTGATTTAATGAGCC 7677
Query 424 ATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 7676 ATTCGCAGTTTCACTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 7618
Query 484 CAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||
Sbjct 7617 CAAGCATATGACTACTGGCAG 7597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510385228288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |