Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq228 702 0.0 seq233 237 5e-60 >seq228 Length=9725 Score = 702 bits (778), Expect = 0.0 Identities = 461/507 (91%), Gaps = 4/507 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| | | |||||||||| ||| |||||||||||||| Sbjct 7412 GTACTCATTCCAATTACAAGACCCGTATGGGCCCTGTATCGTTATATATTGTCACTACCT 7471 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7472 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 7531 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 7532 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTAAAAACCATGGTA 7591 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||| | || || Sbjct 7592 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCTCCAGCA 7651 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||| | |||| |||||||||||| ||| ||| || |||||| || ||| | Sbjct 7652 CAAGGCCATGAGCTTCGAGAAGTTATTATGATTCATCAAACGGCTCCGAAGAGCATTGAT 7711 Query 301 TTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 |||||||||||||||||||||||| || |||||||||||| ||||||||||| Sbjct 7712 TTTTTATCTAATAAATACACCCCTCCCATAACAGTCGGGGTTTTAGTCATGTATTAGCCA 7771 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 7772 CAGAATTACCACGGTTATCCATGTAGTAATGAACTATCAAATAAACGATAACTGATTTAA 7831 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7832 TGAGCCATTCGCAGTTTCACTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCT 7890 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 7891 TTGAGACAAGCATATGACTACTGGCAG 7917 >seq233 Length=9538 Score = 237 bits (262), Expect = 5e-60 Identities = 138/141 (98%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 364 TACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCC 423 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 7736 TACCACGGTTATCCATGTAGTAATGAACTATCAAATAAACGATAACTGATTTAATGAGCC 7677 Query 424 ATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 7676 ATTCGCAGTTTCACTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 7618 Query 484 CAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||| Sbjct 7617 CAAGCATATGACTACTGGCAG 7597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510385228288