Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq14 178 1e-39
seq290 147 2e-30
>seq14
Length=27313
Score = 178 bits (196), Expect = 1e-39
Identities = 836/1314 (64%), Gaps = 38/1314 (3%)
Strand=Plus/Plus
Query 65390 CCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGCCGGACAGT 65449
|||| ||| ||||| | | || || | |||||| | |||||||| || | ||
Sbjct 16671 CCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCACCAGCAAGA 16730
Query 65450 ACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATT 65509
|| | | ||||||||| || |||| || |||||| | || ||| || | |||
Sbjct 16731 ACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAACCCATAATC 16790
Query 65510 TGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATT 65569
|| | ||||| ||||||||||| ||||||||||| | || |||| | || | | |
Sbjct 16791 TGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGACCATCCTTA 16850
Query 65570 TCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGC 65629
| || ||| ||| ||||| | ||||| | | | || | | || |
Sbjct 16851 GCGATCTTGGCCTTCAAAGTCTCCCAATCCCACA---GATCA--GTTGGCTTCTTATT-C 16904
Query 65630 CACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACT 65689
|||||||| | || || | || | || || || || | | | ||||||
Sbjct 16905 CACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTACGTA 16964
Query 65690 CCCTCCTCCTTGGCAAGTTGACAGCTGGT--CTCGAGTGCGGCAAAATAAATGGTCTCGA 65747
||||| ||| | ||| ||| || | ||| || || || || | ||||||||
Sbjct 16965 CCCTCTTCCACAGAAAGCTGATT--TGATTCCTCCAGAGCACCATGGTACAAGGTCTCGA 17022
Query 65748 AAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAA 65807
| || || ||||| ||||| || || || || | |||| | | || || |
Sbjct 17023 ATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGCAATCTGAGCATGAAGA 17082
Query 65808 AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTC 65867
| || || || ||||||||||| |||| | |||| || | | | || ||||| |
Sbjct 17083 ACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCATGTTGGAGTTGC 17142
Query 65868 TCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCA 65927
||||| || || ||||||||||| | || || | || ||||| || ||||| || |
Sbjct 17143 GGGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTTACGTGTGACAA 17202
Query 65928 CATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGG-GAG---TG 65983
| | ||| |||| | || ||||| ||| | || | | | || ||
Sbjct 17203 CCTTGGTGATCTTGTGCAACT--TC----TCAAA--GTTGA--ACCAACAGTGATCCTTG 17252
Query 65984 CCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCA 66043
||||| | ||||| || | | || ||| | ||| || ||| | | ||| ||
Sbjct 17253 TCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCATCT 17312
Query 66044 GGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAAT 66101
|||| | |||||||||| || ||||| ||| | || | ||||| ||||| |
Sbjct 17313 GGAGAAGAGTACTCGACAACCTCACAGCACAAATTC--GAAGACTTGATGGTTCCCAAGT 17370
Query 66102 TCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCT 66161
||| |||||||||||| | ||||| ||||||||||| |||||| | || || ||||| |
Sbjct 17371 TCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTT 17430
Query 66162 CAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGT-----AC 66216
| || | ||| | || | ||| | | ||||| || || | | ||
Sbjct 17431 CTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCTTAACGGTTCTTCTTCCAC 17490
Query 66217 CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTC 66276
|||| |||| |||||| | ||| | | ||| || ||||| | || ||
Sbjct 17491 GTCCCT-CCTTC----TCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATC 17545
Query 66277 GGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACG 66336
|| |||| ||| || ||| | | || | ||| | ||| ||||| |||||
Sbjct 17546 TGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACACG 17605
Query 66337 ACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTC 66396
||| ||||||||||| ||||| || || ||| | ||| ||||| || ||||||
Sbjct 17606 CTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTC 17665
Query 66397 AATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456
| |||||||| || | | |||| ||| |||||||| || |||||||| ||||| |
Sbjct 17666 CTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAA 17725
Query 66457 GTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT 66516
|||||| || | | || | ||| ||||||||||| || || | ||| | |
Sbjct 17726 GTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACT 17785
Query 66517 GTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGG 66576
|||||| ||||| | ||| || | | || || ||| | || ||||| || | |||
Sbjct 17786 GTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTA 17845
Query 66577 GGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636
|| ||| | || || | |||| || |||||||||||||| |||||||| || ||
Sbjct 17846 TGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAAT 17905
Query 66637 GGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690
||||| | || || | | || || ||||| |||||| |||| ||
Sbjct 17906 CAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCAT 17959
>seq290
Length=58723
Score = 147 bits (162), Expect = 2e-30
Identities = 384/582 (66%), Gaps = 13/582 (2%)
Strand=Plus/Minus
Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123
||||||| || |||| || ||||| |||| ||||| || |||||||| || || || |
Sbjct 53667 TGTTCCCTATTCAGTACGATGATATATGGCAAATGTATAAGAAGGCGGAGGCCTCTTTTT 53608
Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG 61183
|||| | |||||| | ||| | || || ||| ||| ||||||| | | | ||
Sbjct 53607 GGACTGCTGAGGAGATTGATCTCTCTAAGGACTTGACTGACTGGAAC-----AACAAGAT 53553
Query 61184 G--TG--AACAACATTT-CATTAAA---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGG 61235
| || ||| | | | | ||| | | ||| ||||| || ||||||||||| || ||
Sbjct 53552 GAATGCCAACGAGAGATACTTTATATCGCGTGTTTTGGCATTTTTTGCCGCTTCTGATGG 53493
Query 61236 TATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCG 61295
||| || | ||||| || || |||| | || |||| ||| | | || || |
Sbjct 53492 TATTGTTGACGAGAACTTGGCACAAAATTTCATGAAGCAGGTTCAATTACCAGAAGCAAG 53433
Query 61296 TTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCT 61355
|| ||||| ||||||||| | ||||| ||||||| |||| ||| || |
Sbjct 53432 AGCCTTTTACGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACCTACTCCCTTTT 53373
Query 61356 CATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415
| || |||||||||| || | ||| || ||||||||||| ||| | ||
Sbjct 53372 ACTTGAAACGTACATCACCGACAAGAAGGAGTCCGACTACTTGTTCAATGCTATCCATAC 53313
Query 61416 GATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGC 61475
|| || | | ||| || || ||||| || | ||||| | || | ||
Sbjct 53312 CATTCCACCTATTAAGGAAAAGGCTCTATGGGCTTTGAGATGGATAAACAATGATGATGC 53253
Query 61476 TACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATC 61535
| | || ||| ||||| | || ||||| | |||||||||| || ||| ||| ||
Sbjct 53252 TTTGTATGCTGAGAGATTGGTCGCCTTTGCTGCCATCGAGGGTGTTTTCTTCTCTGGCTC 53193
Query 61536 GTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAA 61595
||||||| | ||||| ||||||||||| | || | ||||| || || |||||| |||
Sbjct 53192 GTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGACTTACCTTCTCCAA 53133
Query 61596 TGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637
|||| | || | | || ||||| | ||| |||||| ||
Sbjct 53132 TGAGCTTATTTGCAGGGATGAGGGTCTACATACTGATTTCGC 53091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563261237920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |