Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq13 479 1e-132 >seq13 Length=5733 Score = 479 bits (530), Expect = 1e-132 Identities = 523/680 (77%), Gaps = 46/680 (7%) Strand=Plus/Plus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 |||||||||||||||||||||| ||||||||||| |||| |||| ||| | ||||| ||| Sbjct 2600 CGACGAGTCGAGTTGTTTGGGATTGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 2659 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||||| | || ||||||||||||| ||||||| |||||| ||||||||||||| ||||| Sbjct 2660 AAATAATAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 2719 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 | ||||||||| ||| || ||||||||||||||||||||||| | | | | ||| || Sbjct 2720 GAAAAGAGAGTGAAATAGTACGTGAAATTGTTGAAAGGGAAGGGTATCTGATCCGACGTG 2779 Query 216 CCCGC-AGTTGCTCAACCGGCCCCTC-GGCCGGTGCAC---TCTTCTGCGGTCAGGCCAG 270 || || || || |||| | ||| ||||| | | || | | | |||||| Sbjct 2780 GTATTTAGATG-TCG-CCTGCCCTTGTGGCGGGTGCTCCATTTTTTTACTG---GGCCAG 2834 Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGG---GAATGTGGCC-----CCCTTCGGG- 321 | | || | | || || |||||| || |||||| ||| ||||| ||| Sbjct 2835 CGTGAGTTAGAAGGGGATGA-AAAGGCG--GGAACGAATGTAGCCTTCCTCCCTTTGGGA 2891 Query 322 ---GGGTGTTATAGC---CCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375 |||||||||| | || | | | || ||| ||||||||||||| | Sbjct 2892 GAGGGGTGTTATAACATTCCTGTTTAGTT-----CCTTTCTG-ACTGAGGTCCGCGGTTT 2945 Query 376 GG------CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 | |||| |||||| || | | | |||||||||| |||| ||||||| Sbjct 2946 TTTATTACCAAGGACGCTGGCAGAACGAGCAGATACCGCCCGTCTTGAAACATGGACCAA 3005 Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTG--TCAAACCCGTG-CGCGTAATGAAAGTG 486 |||| ||||| |||||||||||||||||||| | |||||| | |||| |||||||||| Sbjct 3006 GGAGACTAACGTCTATGCGAGTGTTTGGGTGGATAAAACCCATAACGCGGAATGAAAGTG 3065 Query 487 AACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT---CGGATG 543 |||| |||| ||| | | | || |||| |||||||||||| || || || | || | Sbjct 3066 AACGTAGGTCGGAGCTGTTAAAGGCGCACGATCGACCGATCCAGAAGTTTTTATCTGAAG 3125 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3126 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 3185 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 3186 CGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTC 3245 Query 664 AAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| Sbjct 3246 GAATTTGGGTATAGGGGCGA 3265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996160450