Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq13 479 1e-132
>seq13
Length=5733
Score = 479 bits (530), Expect = 1e-132
Identities = 523/680 (77%), Gaps = 46/680 (7%)
Strand=Plus/Plus
Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95
|||||||||||||||||||||| ||||||||||| |||| |||| ||| | ||||| |||
Sbjct 2600 CGACGAGTCGAGTTGTTTGGGATTGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 2659
Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155
||||| | || ||||||||||||| ||||||| |||||| ||||||||||||| |||||
Sbjct 2660 AAATAATAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 2719
Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
| ||||||||| ||| || ||||||||||||||||||||||| | | | | ||| ||
Sbjct 2720 GAAAAGAGAGTGAAATAGTACGTGAAATTGTTGAAAGGGAAGGGTATCTGATCCGACGTG 2779
Query 216 CCCGC-AGTTGCTCAACCGGCCCCTC-GGCCGGTGCAC---TCTTCTGCGGTCAGGCCAG 270
|| || || || |||| | ||| ||||| | | || | | | ||||||
Sbjct 2780 GTATTTAGATG-TCG-CCTGCCCTTGTGGCGGGTGCTCCATTTTTTTACTG---GGCCAG 2834
Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGG---GAATGTGGCC-----CCCTTCGGG- 321
| | || | | || || |||||| || |||||| ||| ||||| |||
Sbjct 2835 CGTGAGTTAGAAGGGGATGA-AAAGGCG--GGAACGAATGTAGCCTTCCTCCCTTTGGGA 2891
Query 322 ---GGGTGTTATAGC---CCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375
|||||||||| | || | | | || ||| ||||||||||||| |
Sbjct 2892 GAGGGGTGTTATAACATTCCTGTTTAGTT-----CCTTTCTG-ACTGAGGTCCGCGGTTT 2945
Query 376 GG------CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429
| |||| |||||| || | | | |||||||||| |||| |||||||
Sbjct 2946 TTTATTACCAAGGACGCTGGCAGAACGAGCAGATACCGCCCGTCTTGAAACATGGACCAA 3005
Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTG--TCAAACCCGTG-CGCGTAATGAAAGTG 486
|||| ||||| |||||||||||||||||||| | |||||| | |||| ||||||||||
Sbjct 3006 GGAGACTAACGTCTATGCGAGTGTTTGGGTGGATAAAACCCATAACGCGGAATGAAAGTG 3065
Query 487 AACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT---CGGATG 543
|||| |||| ||| | | | || |||| |||||||||||| || || || | || |
Sbjct 3066 AACGTAGGTCGGAGCTGTTAAAGGCGCACGATCGACCGATCCAGAAGTTTTTATCTGAAG 3125
Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3126 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 3185
Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3186 CGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTC 3245
Query 664 AAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||
Sbjct 3246 GAATTTGGGTATAGGGGCGA 3265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996160450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |