Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq13 325 6e-87
>seq13
Length=5733
Score = 325 bits (360), Expect = 6e-87
Identities = 230/261 (88%), Gaps = 4/261 (2%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1575 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 1516
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | |||| || || || |||||||||||||| ||
Sbjct 1515 ACCTGTTATTGCCTCAAACTTCCTTCGGCTTGACACCGATGGTCCCTCTAAGAAGT-AGA 1457
Query 121 CACCAACCATAGTCGATGGGGCTA---TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
| | | || | || ||| ||| |||||||||||||||||||||||||||||| ||
Sbjct 1456 CTTCCAGCAAAAACGCTGGCTCTACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAA 1397
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
|||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1396 TTAAGCAGACAAATCATTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCA 1337
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||||||||||
Sbjct 1336 AGAAAGAGCTCTCAATCTGTC 1316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798618299
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |