Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq13 325 6e-87 >seq13 Length=5733 Score = 325 bits (360), Expect = 6e-87 Identities = 230/261 (88%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1575 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 1516 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||| | |||| || || || |||||||||||||| || Sbjct 1515 ACCTGTTATTGCCTCAAACTTCCTTCGGCTTGACACCGATGGTCCCTCTAAGAAGT-AGA 1457 Query 121 CACCAACCATAGTCGATGGGGCTA---TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | | | || | || ||| ||| |||||||||||||||||||||||||||||| || Sbjct 1456 CTTCCAGCAAAAACGCTGGCTCTACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAA 1397 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||| ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||| Sbjct 1396 TTAAGCAGACAAATCATTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCA 1337 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||| Sbjct 1336 AGAAAGAGCTCTCAATCTGTC 1316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798618299