Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq13 453 2e-125
>seq13
Length=5733
Score = 453 bits (502), Expect = 2e-125
Identities = 279/296 (94%), Gaps = 1/296 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
||||||| |||||| || | | ||| |||||||||||||||||||||||||||||
Sbjct 5360 TACTAAGTTCAATTACTATCGAGATGACACCTCATCAGTAGGGTAAAACTAACCTGTCTC 5301
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5300 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 5241
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 5240 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTA 5181
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5180 TGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 5121
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5120 TCAAATTCTGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 5065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398470624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |