Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq13 376 5e-102 >seq13 Length=5733 Score = 376 bits (416), Expect = 5e-102 Identities = 272/312 (87%), Gaps = 3/312 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCCGGCTTCTT 77 || ||||||||||||||||||||||| ||| || ||| || || | | |||||| Sbjct 1407 GAACGAGACCTTAACCTGCTAAATAGTAGAGCCAGCGTTTTTGCTGGAAGTCTACTTCTT 1466 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1467 AGAGGGACCATCGGTGTCAAGCCGAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 1526 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||| ||||||||||||||||||||||||||||| |||||| ||||| | |||| | Sbjct 1527 TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATTTAACCTAAG 1586 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||| | |||||| |||| |||||| ||||||||||||||||||||||| ||||| Sbjct 1587 CCGAGAGGCCCGGGTAACCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTGGAATTA 1646 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct 1647 TTGCTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCC 1706 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 1707 CTGCCCTTTGTA 1718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198304512