Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq13 376 5e-102
>seq13
Length=5733
Score = 376 bits (416), Expect = 5e-102
Identities = 272/312 (87%), Gaps = 3/312 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCCGGCTTCTT 77
|| ||||||||||||||||||||||| ||| || ||| || || | | ||||||
Sbjct 1407 GAACGAGACCTTAACCTGCTAAATAGTAGAGCCAGCGTTTTTGCTGGAAGTCTACTTCTT 1466
Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136
|||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1467 AGAGGGACCATCGGTGTCAAGCCGAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 1526
Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196
||||| ||||||||||||||||||||||||||||| |||||| ||||| | |||| |
Sbjct 1527 TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATTTAACCTAAG 1586
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||| | |||||| |||| |||||| ||||||||||||||||||||||| |||||
Sbjct 1587 CCGAGAGGCCCGGGTAACCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTGGAATTA 1646
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||
Sbjct 1647 TTGCTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCC 1706
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 1707 CTGCCCTTTGTA 1718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947198304512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |