Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq13 719 0.0 >seq13 Length=5733 Score = 719 bits (796), Expect = 0.0 Identities = 486/539 (90%), Gaps = 8/539 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5033 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 4974 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 4973 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCAACCCGGATC 4914 Query 127 GGCCCGCGA-AGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185 | || ||| ||| | || |||| ||| || |||| |||||| |||| Sbjct 4913 ACCTATAGATAGG--CTTGATGCTAGAACGTGGATCTTGCGATCCAGCTCCGCTCAATTG 4856 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | | ||||||||||| |||| ||||||||||||||||| |||||||| |||||||||| Sbjct 4855 AATGAGTAAAAAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 4799 Query 246 ATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||||||||| ||| | ||| |||||||| ||| ||||||||||||||||||||||||| Sbjct 4798 GTTCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 4740 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 4739 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 4680 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 4679 TAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATGACGAGGCA 4620 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4619 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCGTTGAATTT 4560 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 4559 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCATTTTCTG 4501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197072992