Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq13 719 0.0
>seq13
Length=5733
Score = 719 bits (796), Expect = 0.0
Identities = 486/539 (90%), Gaps = 8/539 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5033 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 4974
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 4973 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCAACCCGGATC 4914
Query 127 GGCCCGCGA-AGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
| || ||| ||| | || |||| ||| || |||| |||||| ||||
Sbjct 4913 ACCTATAGATAGG--CTTGATGCTAGAACGTGGATCTTGCGATCCAGCTCCGCTCAATTG 4856
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| | ||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 4855 AATGAGTAAAAAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 4799
Query 246 ATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
||||||||| ||| | ||| |||||||| ||| |||||||||||||||||||||||||
Sbjct 4798 GTTCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 4740
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 4739 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 4680
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 4679 TAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATGACGAGGCA 4620
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4619 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCGTTGAATTT 4560
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4559 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCATTTTCTG 4501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197072992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |