Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq13 145 1e-32 >seq13 Length=5733 Score = 145 bits (160), Expect = 1e-32 Identities = 115/134 (86%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| | |||||| ||||||||| |||| | |||| | Sbjct 5358 GTACGAGAGGAACCGTTCA-TTCAGA-TCATTGGTAATTGCGGCTGCCTGAGCGGGCACT 5415 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| | Sbjct 5416 ACCGCGAAGCTATCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCTA 5475 Query 121 GAACGGGG-TGATT 133 ||| |||| ||||| Sbjct 5476 GAAAGGGGATGATT 5489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198579456