Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq13 614 2e-173 >seq13 Length=5733 Score = 614 bits (680), Expect = 2e-173 Identities = 445/506 (88%), Gaps = 8/506 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| Sbjct 617 GTACTCATTCCAATTACAAGACCCTTAAGGGCCCTGTATCGTTATATATTGTCACTACCT 558 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 557 CCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 498 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 | | ||||||| ||||||||| ||||||| |||||||||| |||||| || | ||| Sbjct 497 TTTAAGGCTCCTTCTCCGGAACCGAACCCGAATTCCCCGTCACCCGTAACTAGCTACGTA 438 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||| ||| || |||||||||||||||||||||||||||| | ||||| Sbjct 437 GGCCTCTATCCTA-CAT-ACAACTTGATAGGGCAGAAATTTGAATGAACCAGCCCCGGCA 380 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||| | |||| |||||||||||| ||| ||| | |||||| ||| ||| | Sbjct 379 CAAGGCCATGGGCTTCGAGAAGTTATTATGATTCATCAA-ACGGCCCGAA-GGCATTGAT 322 Query 301 TTTTTATCTAATAAATACACCCCTTC--CGAAGTCGGGGTTTTTAGCATGTATTAGCTCT 358 |||||||||||||||||||||||| | ||||||||||||| ||||||||||| Sbjct 321 TTTTTATCTAATAAATACACCCCTCCAATAAAGTCGGGGTTTTAGTCATGTATTAGCCAC 262 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 261 AGAATTACCACGGTTATCCATGTAGTAA-CAACTATCAAATAAACAATAACTGATTTAAT 203 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 202 GAGCCATTCGCAGTTTCACTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTT 144 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 143 TGAGACAAGCATATGACTACTGGCAG 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397296384