Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq13 614 2e-173
>seq13
Length=5733
Score = 614 bits (680), Expect = 2e-173
Identities = 445/506 (88%), Gaps = 8/506 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||
Sbjct 617 GTACTCATTCCAATTACAAGACCCTTAAGGGCCCTGTATCGTTATATATTGTCACTACCT 558
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 557 CCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 498
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
| | ||||||| ||||||||| ||||||| |||||||||| |||||| || | |||
Sbjct 497 TTTAAGGCTCCTTCTCCGGAACCGAACCCGAATTCCCCGTCACCCGTAACTAGCTACGTA 438
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||| ||| || |||||||||||||||||||||||||||| | |||||
Sbjct 437 GGCCTCTATCCTA-CAT-ACAACTTGATAGGGCAGAAATTTGAATGAACCAGCCCCGGCA 380
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||| | |||| |||||||||||| ||| ||| | |||||| ||| ||| |
Sbjct 379 CAAGGCCATGGGCTTCGAGAAGTTATTATGATTCATCAA-ACGGCCCGAA-GGCATTGAT 322
Query 301 TTTTTATCTAATAAATACACCCCTTC--CGAAGTCGGGGTTTTTAGCATGTATTAGCTCT 358
|||||||||||||||||||||||| | ||||||||||||| |||||||||||
Sbjct 321 TTTTTATCTAATAAATACACCCCTCCAATAAAGTCGGGGTTTTAGTCATGTATTAGCCAC 262
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 261 AGAATTACCACGGTTATCCATGTAGTAA-CAACTATCAAATAAACAATAACTGATTTAAT 203
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 202 GAGCCATTCGCAGTTTCACTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTT 144
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 143 TGAGACAAGCATATGACTACTGGCAG 118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397296384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |