Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq115 165 6e-36
>seq115
Length=359903
Score = 165 bits (182), Expect = 6e-36
Identities = 553/856 (65%), Gaps = 10/856 (1%)
Strand=Plus/Minus
Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148
|| || || | ||||| |||||||||||| | || || ||||| ||||| |||||| |
Sbjct 5845 ATAGTACCGAGATTCTTTTGATTACTCTTTCTGTTACAAGCATCTTTGTAGATCATGAAT 5786
Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
||||| || || ||| ||||| ||| | || | |||||| ||||||| ||
Sbjct 5785 GGAGTACCAGTTTCAGTTTGGGCCTCCAAAATCTGATACCAAAGCTTTTGTGCCTTGACA 5726
Query 66209 GTACGT--ACCGC--CCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264
|| | | ||| | ||| ||||| || || | ||| | | |||||| ||
Sbjct 5725 GTTCTTCTACCACGACCTTCCTTT----TCATATTTGGTGTACAATTTTTCGAACTCATC 5670
Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGT-GGACACATCAGCGACCAATCACCAT 66323
||| | || ||||| || | ||| ||| | || | | || | ||| |||||
Sbjct 5669 ACCGTAGACATCGGAAAGGCCAGGAG-CTTCAGAAGGTGAGAACAAAGTCCATGGACCAT 5611
Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383
| ||| ||||| ||| || |||||||| ||||| || || ||| | ||| || |
Sbjct 5610 TTTCTTCCACACGCTTCATGAAAAGATCAGGAATCCAAAGAGCTGGGAACAAATCACGGG 5551
Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443
||| ||| || | || || || | || | |||| ||| || ||||| || ||||
Sbjct 5550 CTCTAATCTCTTCCTTACCATGGTTCATCCGGATATCGATGAAATCGAAGATATCTGCAT 5491
Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503
|||| ||||||| |||| ||| | | || ||| ||| |||||||| ||||| |
Sbjct 5490 GCCAAGGTTCCAAATAGACGGCAATGGCACCAGGACGCTTGTTACCACCTTGATCGACAT 5431
Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563
| | || | ||||||||||||| | ||| || | || || ||||| | |||||||
Sbjct 5430 ATCTGGCAGTACTGTTGAAGACACGAATCATAGGAATGATACCATTAGAAGTACCATTGG 5371
Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623
| || | ||| || || || || || | || | || || ||| ||||||||||
Sbjct 5370 TACCTGCAATGTATGAGCCAGTAGCACGAATGTTATGGATATGCATACCGATACCACCGG 5311
Query 66624 CCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683
| || || || || ||| || | || || | | || || || |||||||||
Sbjct 5310 CGGTTTTAGAAATTAAAGCGCACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGTCAT 5251
Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743
| || |||| | | | | |||||| | || ||| | || || | || ||| |
Sbjct 5250 CTTTCATGGCAACCAAGAAACATGAAGACATCTGAGGTCTAGGAGTACCTGCATTGAACA 5191
Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803
||| |||| ||| ||||| |||||| | ||||||| ||||| | ||| | ||
Sbjct 5190 AGGTTGGTGAAGCATGCGTGAAGTAACGTTTAGACATGAGGTTGTAAGACTCAAGAACTT 5131
Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT 66863
| ||| | ||||| || || | ||| |||||||| | | ||||| | |
Sbjct 5130 TAGGAATATCACTACCATGGATACCAACGGCAACACGCATCAGTAAATGCTGAGGTCTCT 5071
Query 66864 CGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGT 66923
|| | | | | ||||| | || || || ||||||| || |||| ||| || |
Sbjct 5070 CGGCGACTTTACCGTTGATTCTAAGCAAATATGACCGTTCCAACGTTTTGAAACCGAAAT 5011
Query 66924 ACGAGTAATTGAAATC 66939
| ||| ||||||||
Sbjct 5010 AATTGTAGTTGAAATC 4995
Score = 82.4 bits (90), Expect = 6e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 67061 GTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGT 67120
||||||||||||| ||| ||||| || | ||| || |||| | |||| || |||||
Sbjct 4846 GTCTGCTTGTGCAAGTTCGAGATTGCCAAACGTGCAGCCAATGTAGCATAGTCAGGATGC 4787
Query 67121 AGAGTCATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACA 67180
||||| |||| || ||||| || || | ||| |||| | ||| |||| ||||||
Sbjct 4786 AGAGTAGTCATGTAAGCTGCAGTCTCGGCAGTTAAGTTATCCAACTCAACGGTGGTCACA 4727
Query 67181 CCAGGATACAGGCCAGCAACGAC 67203
||||| || | || | ||||||
Sbjct 4726 CCAGGGTAAACACCTGTAACGAC 4704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567132680560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |