Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq102 104 9e-17 >seq102 Length=123167 Score = 104 bits (114), Expect = 9e-17 Identities = 169/239 (71%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 364334 GCCTCAATGTTAAAGTTGTTGAAAGCGGTAGCATTAACCCTC-TCTCCTCGCAAGGCTCC 364392 || |||| | | |||| | |||| | ||||||| | || || | || ||||| || | Sbjct 105566 GCATCAACGGTTAAGTCGGTGAATGGCGTAGCATCA-CCTTCGTAACCACGCAATGCAGC 105508 Query 364393 CACCTTGGAGGCTACAATC--TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAG 364450 |||||| || | |||| | || | | | ||| |||||||||||| ||||| | Sbjct 105507 CACCTTAGA--CAACAAACACTCAACCAAATGGGCAACAGTCATACGAGATGGAATACAA 105450 Query 364451 AGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCGGGA 364510 ||||||| |||||||| ||||| || || || ||||| || || ||||||||||| | Sbjct 105449 TGAGGGTTAATGATGATATCAGGAACAATACCTTCAGCTGTGAATGGCATATCTTCATGC 105390 Query 364511 GGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | | ||||||||| ||||| || ||| ||||| || ||||| || ||||| Sbjct 105389 CTGTAGGTCATACCAATGGTACCCTTCTGACCATGACGAGATGCGAACTTATCACCAAT 105331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884882077130847