Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq52 352 5e-95 >seq52 Length=7685 Score = 352 bits (390), Expect = 5e-95 Identities = 228/247 (92%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1379 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 1438 Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 1439 AATAATAAAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 1498 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 1499 AATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 1558 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 1559 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 1617 Query 312 TTAGGGG 318 ||||||| Sbjct 1618 TTAGGGG 1624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199304448