Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq52 506 8e-141 >seq52 Length=7685 Score = 506 bits (560), Expect = 8e-141 Identities = 517/658 (79%), Gaps = 20/658 (3%) Strand=Plus/Plus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 ||| |||||||||||||||||||||||||||||| |||| |||| ||| | ||||| ||| Sbjct 3165 CGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 3224 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 |||||| ||| ||||||||||||| ||||||| |||||| ||||||||||||| ||||| Sbjct 3225 AAATATGGGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 3284 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 | ||||||||| |||||| ||||||||||||||||||||||| | | | | ||| || Sbjct 3285 GAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGTATTTGATCCGACATG 3344 Query 216 CCCGC-AGTTGCTCAACCGGCCCCTCGGCCGGTGCAC--TCTTCTG-CGGTCAGGCCAGC 271 || || || | |||| ||| || || | |||| | | | ||||||| Sbjct 3345 GTATTTAGATG-TCGCTTGCCCCCGTGGCGGGCGCTCCATCTTTTTACTG---GGCCAGC 3400 Query 272 ATCAGCTC-GGGCGGTCGGATAA-AGGCCCCGG-GAATGTGGCCCCCTTCGGGGGGTGTT 328 ||| | | |||||| || | ||| | | |||||| ||||| |||||| || Sbjct 3401 ATCGGTGCTGGGCGG---GACAGGAGGTTTCTGTGAATGTAGCCCC--TCGGGGAAC-TT 3454 Query 329 ATAGCCCGGGGTGGA-ATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 |||| | || | | | | | | || | || |||| | ||| | |||||||| Sbjct 3455 ATAGAACAGGATTCATACGTCTCTCCCCGGTACCGAGGACTGCGGGAAACCAAGGATGCT 3514 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 ||| ||| | | | |||||||||| |||| ||||||||||| ||||| ||||||| Sbjct 3515 GGCATAACGAGCAAATACCGCCCGTCTTGAAACATGGACCAAGGAGACTAACGTCTATGC 3574 Query 448 GAGTGTTTGGGTGTCAAACCCGTG-CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||||||||||| |||| | |||| |||||||||||||| ||| ||| ||| | Sbjct 3575 GAGTGTTTGGGTGGAAAACTCACAACGCGAAATGAAAGTGAACGTAGGACGGAGCCCTTA 3634 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCT-TCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||| |||| |||||||||| ||| | | | ||| ||||||||||||||||||||||| Sbjct 3635 AGGGCGCACGTCCGACCGATCCAGATATTTATTGGAAGGATTTGAGTAAGAGCATAGCTG 3694 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3695 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGT 3754 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 3755 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 3812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998369800