Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq52 506 8e-141
>seq52
Length=7685
Score = 506 bits (560), Expect = 8e-141
Identities = 517/658 (79%), Gaps = 20/658 (3%)
Strand=Plus/Plus
Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95
||| |||||||||||||||||||||||||||||| |||| |||| ||| | ||||| |||
Sbjct 3165 CGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTATATTCCATCTAAGGCT 3224
Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155
|||||| ||| ||||||||||||| ||||||| |||||| ||||||||||||| |||||
Sbjct 3225 AAATATGGGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 3284
Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
| ||||||||| |||||| ||||||||||||||||||||||| | | | | ||| ||
Sbjct 3285 GAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGTATTTGATCCGACATG 3344
Query 216 CCCGC-AGTTGCTCAACCGGCCCCTCGGCCGGTGCAC--TCTTCTG-CGGTCAGGCCAGC 271
|| || || | |||| ||| || || | |||| | | | |||||||
Sbjct 3345 GTATTTAGATG-TCGCTTGCCCCCGTGGCGGGCGCTCCATCTTTTTACTG---GGCCAGC 3400
Query 272 ATCAGCTC-GGGCGGTCGGATAA-AGGCCCCGG-GAATGTGGCCCCCTTCGGGGGGTGTT 328
||| | | |||||| || | ||| | | |||||| ||||| |||||| ||
Sbjct 3401 ATCGGTGCTGGGCGG---GACAGGAGGTTTCTGTGAATGTAGCCCC--TCGGGGAAC-TT 3454
Query 329 ATAGCCCGGGGTGGA-ATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387
|||| | || | | | | | | || | || |||| | ||| | ||||||||
Sbjct 3455 ATAGAACAGGATTCATACGTCTCTCCCCGGTACCGAGGACTGCGGGAAACCAAGGATGCT 3514
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447
||| ||| | | | |||||||||| |||| ||||||||||| ||||| |||||||
Sbjct 3515 GGCATAACGAGCAAATACCGCCCGTCTTGAAACATGGACCAAGGAGACTAACGTCTATGC 3574
Query 448 GAGTGTTTGGGTGTCAAACCCGTG-CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506
||||||||||||| |||| | |||| |||||||||||||| ||| ||| ||| |
Sbjct 3575 GAGTGTTTGGGTGGAAAACTCACAACGCGAAATGAAAGTGAACGTAGGACGGAGCCCTTA 3634
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCT-TCGGATGGATTTGAGTAAGAGCATAGCTG 565
|||| |||| |||||||||| ||| | | | ||| |||||||||||||||||||||||
Sbjct 3635 AGGGCGCACGTCCGACCGATCCAGATATTTATTGGAAGGATTTGAGTAAGAGCATAGCTG 3694
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3695 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGT 3754
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 3755 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 3812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079998369800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |