Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq52 398 1e-108 >seq52 Length=7685 Score = 398 bits (440), Expect = 1e-108 Identities = 277/311 (89%), Gaps = 3/311 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCT-TTGGCGGGTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| || || || || || ||||||| Sbjct 1965 GAACGAGACCTTAACCTGCTAAATAGTGGTACCAGCAGTTTGCTGGAGATTCACTTCTTA 2024 Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2025 GAGGGACTATCGGTGTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 2084 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 |||| ||||||||||||||||||||||||||||| |||||| ||||| | | |||||||| Sbjct 2085 TAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTAC-TAACCTTGGC 2143 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 || |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| Sbjct 2144 CGAGAGGTCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGGAATTAT 2203 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 |||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct 2204 TGCTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCC 2263 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 2264 TGCCCTTTGTA 2274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199280128