Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq52 688 0.0 >seq52 Length=7685 Score = 688 bits (762), Expect = 0.0 Identities = 462/510 (91%), Gaps = 8/510 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| Sbjct 1154 GTACTCATTCCAATTACAAGACCCATAAGGGCCCTGTATCGTTATATATTGTCACTACCT 1095 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1094 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1035 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| Sbjct 1034 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAAAAACCATGGTA 975 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||| | || || Sbjct 974 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCTCCAGCA 915 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 | ||||||||| | |||| |||||||||||||||| ||| | |||||| ||| ||| Sbjct 914 CGAAGGCCATGAGCTTCGAAAAGTTATTATGAATCATCAA-ACGGCCCGAA-GGCATTGA 857 Query 300 TTTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 ||||||||||||||||||||||||| || |||| ||||| | ||||||||||| Sbjct 856 TTTTTTATCTAATAAATACACCCCTCCCATAACAGTCAGGGTTCTAGTCATGTATTAGCC 797 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAG--GTACTATCAAATAAACGATAACTGATT 414 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 796 ACAGAATTACCACGGTTATCCATGTAGTAAGAAAAACTATCAAATAAACGATAACTGATT 737 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 736 TAATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAA 677 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 676 TCTTTGAGACAAGCATATGACTACTGGCAG 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398852096