Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq12 208 6e-49
seq23 168 5e-37
seq16 86.0 5e-12
>seq12
Length=1129233
Score = 208 bits (230), Expect = 6e-49
Identities = 1180/1877 (63%), Gaps = 42/1877 (2%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || ||||| ||||| ||| |||||| |||| ||| | | |||||||| || |||
Sbjct 53956 TCAACGGTGAATTGGATTGCAGCAGCAGCAGCCTGGGTACGCAAGTAGTACATACCAGTC 53897
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| || || ||| | ||||| |||||||| | ||||| | | || |
Sbjct 53896 TTTAGCCCCTTCTTCCAGCCGTAGAAGTGCATCGAAGTCAATTTACCCATGGTAGGAGCC 53837
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257
| || || |||| |||||| |||||||| ||| ||| | || || |||||
Sbjct 53836 TGTAAGTGGATGTTCATCGACTGCGACTGATCGAGGTAGGCACCTCTGTCAGCTGCCATA 53777
Query 65258 TCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATT 65317
|| |||||| | | | ||||||||| || ||| || || || | |
Sbjct 53776 TCGATGATAGCCTTTTGTGGGAGCTCCCAGACAGTACGGTAGAGCTTTTTTATCTTATCT 53717
Query 65318 GGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATCGA 65376
|||| | | | ||||| ||||| | |||| |||||| || ||| |
Sbjct 53716 GGAACGTTTGGCAAATTCTGGATCGAACCGTTGTCGTG-AATAATAAAGTTCTTCATGGC 53658
Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436
|| ||| | ||||| ||||| || | | | || || | |||||| || |||||
Sbjct 53657 ATCATTCCAGATACCCATATCGACAAAGTCTCTCAACATGTAAGGATTGACGATCTGGAA 53598
Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496
||| || | || || | | |||||||| || |||| ||| |||||| | || |
Sbjct 53597 CTCACCTGCGAGAACTCTTCTCTGGTAGATGTTCGAGGTGAAGGGCTCAAAGCACTCGTT 53538
Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556
| ||| | ||| |||| |||||| || |||||||| || || ||||| | |||||||
Sbjct 53537 ATAGCCCATAATCTGGGAAGTAGAAGCTGTTGGCATTGGTGCCACCAAGAGCGAGTTTCT 53478
Query 65557 CAATCCGTTCATTTCAATGTTGTGACG-CAATTCGTCCCAGTTCCACATCGGTTTATCG- 65614
||| |||||| | |||| ||| ||| ||| ||||| | ||| | ||||
Sbjct 53477 CAAACCGTTCTTGGCAATCTTG-GACTTCAAAGAATCCCAATCCCAAAG------ATCGG 53425
Query 65615 TCGACATCC-ACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673
| | | || || ||| | ||| ||| | || | || || |||||
Sbjct 53424 TAGGCTTCTTACC--CCATAAATCGAATTGTAATAAGCCCTTGGATGCAGGAGAACCCTC 53367
Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733
| || || || |||||||| | ||| |||| || | |||||| || ||
Sbjct 53366 ATAGCTCTCATATGTACCCTCCTCTTCGGCCAGTTCCGAGGATGCCTCGAGAGCAGCGTG 53307
Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793
||||| |||||||| || | || | | |||||| || || || |||| |
Sbjct 53306 GTAAATAGTCTCGAAGATTTGAATGTTCAACTGACGTGCTTCTGGACTGTCAAACGGAAG 53247
Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853
| |||| ||| || |||||||| | |||||| || |||| | ||| || | | |||
Sbjct 53246 GCGCATCTGGAAGAAGGTGTCGGCTAAACCTTGCACACCAACAGCGACTGGTCTGTTACG 53187
Query 65854 CAAATTGGA---ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910
|| || || |||| ||||| || ||||| || || || | || || | || ||
Sbjct 53186 CATGTTAGAGTAACGT---GCCTCTGGGACAGGATAATAGTTTCTGTCAATGACACGGTT 53130
Query 65911 CAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970
||| || || || | || | | || |||| | ||||| | | ||
Sbjct 53129 CAAGTTCCGAGTAAGAACTTTGGCAATCTTATGCAACTTCTCGAAGT-------TGTACC 53077
Query 65971 ACGATCGGGAGTGCCG---GACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027
|||| || | || || | ||||| || ||| |||||| || | ||| ||
Sbjct 53076 ACGA--GGTCTTTTCGTCAGATTCGACAAAGGCCGGGAGGCAAAGAGAAGCCAAGTTACA 53019
Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087
|||| | | ||||| || || | ||||||||||| || ||| | || | |
Sbjct 53018 GACACCAGTTTCGTCTGGTGCTGAGTACTCGACAATCTCACAGCATAAGTTCGAGGACTT 52959
Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147
||||| ||||| |||||||| |||||||| | || |||||||||||||| | |||| |
Sbjct 52958 GATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCATGAA 52899
Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207
||||| ||||| ||| |||| || | || || ||| | | ||||| ||
Sbjct 52898 TGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCTGAGCCTTGAC 52839
Query 66208 CGTACGT--ACCGC---CCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262
|||||| ||||| ||| ||| | ||||| | ||| | | || ||
Sbjct 52838 GGTACGTCTACCGCGTCCCTCCCTCT-----CGTAACGCGTGTATAAGGCCTCAAACTCG 52784
Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322
|| || | || || || || | ||| | | ||| | | || | ||| | |||
Sbjct 52783 TCTCCGTACACGTCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGACCG 52724
Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382
| ||| || ||||| ||| || | || || ||||| ||||| ||| | ||| ||
Sbjct 52723 TTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCACGG 52664
Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442
|| || ||||| | || ||||| || | | || | ||| || |||||||| ||
Sbjct 52663 GCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCTGCG 52604
Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502
||||||||||||| || | || | | || | |||| || ||||||||||||
Sbjct 52603 TGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTGTTACCTCCTTGGTCGACG 52544
Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562
|| | || |||||||| ||||| | ||| || | | || || || | || |||
Sbjct 52543 TATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACCGTTG 52484
Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622
|| ||| ||||| || || || || | | ||||| || || ||||||||| |||
Sbjct 52483 GTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATACCAATACCGCCG 52424
Query 66623 GCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682
|| |||||||| || ||||| || || || | | ||||| ||||| || ||
Sbjct 52423 GCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATAGAATCG 52364
Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742
|||| || | | | |||| ||| | || || | || || | || |||
Sbjct 52363 TCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCATTGAAC 52304
Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802
| || || | |||||| || || ||| | ||||| || || |||||||||||
Sbjct 52303 AAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCGATGACT 52244
Query 66803 GCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGT 66862
|| | || |||||||| |||| ||| || ||| | || | ||| || |
Sbjct 52243 CTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGTGGTCTC 52184
Query 66863 TCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922
|| | | | | ||||| || || ||||| || |||| ||| |||| |||||||
Sbjct 52183 TCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAACCAAAG 52124
Query 66923 TACGAGTAATTGAAATC 66939
|| ||| ||||| ||
Sbjct 52123 TAGTTGTAGTTGAAGTC 52107
>seq23
Length=838141
Score = 168 bits (186), Expect = 5e-37
Identities = 386/573 (67%), Gaps = 15/573 (3%)
Strand=Plus/Plus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| | ||| ||||||| | | | || || ||||||| ||| | || || |||
Sbjct 742128 GAACCTTTGTTGAAAGAGAACAAGCATAGATTTGTCATGTTCCCTATCCAATACGATGAT 742187
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| ||||| ||||| || |||||||| | ||| ||| ||||| |
Sbjct 742188 ATTTGGCAGATGTACAAGAAGGCTGAAGCATCTTTCTGGACTGCGGAAGAGATCGATCTC 742247
Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202
|| || || | ||||||| || | ||| | | |||| | |||||||
Sbjct 742248 TCAAAGGATGTTCCTGACTGGAAGAACAAGCTTAATGC-CAATGAAAGATATTTCATCGC 742306
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| ||||||||| ||||||||||| || || |||||||| |||||||||| | ||
Sbjct 742307 ACGTGTGTTGGCCTTCTTTGCCGCCTCTGATGGTATCGTTGATGAGAATTTGATTCAAAA 742366
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| | ||| | || || || | ||||| | |||||||| |||||||| |
Sbjct 742367 CTTCACACAGAACGTTCAGCTGCCAGAGGCTAGGGCCTTCTACGGATTCCAGATCATGGT 742426
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| |||| || |||| || | | | | || || ||| | | || |
Sbjct 742427 GGAGAACATCCATTCTGAGACCTATTCTCTCTTGCTTGAAACCTACGTGACAGATAAGAA 742486
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442
|||| ||| || || |||||||| || || || || | | || ||||| | |
Sbjct 742487 GGAATCTGATTACTTATTTAATGCCATTGAAACTATTCCCCCAATTAA--GGAAAAGGCA 742544
Query 61443 T--TGGGC-CTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTG 61497
| ||||| |||| |||||||| ||| ||| | || || | ||| ||||| |
Sbjct 742545 TTATGGGCTCTTC-GTTGGATCAACAG--CAAGGATGCACTATACGCAGAAAGATTGGTC 742601
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| || || | |||| ||||| || ||| || || ||||| || ||||||||| |
Sbjct 742602 GCCTTCGCCGCTATCGAAGGTGTCTTCTTCTCCGGTTCATTTGCGGCCATCTTTTGGCTA 742661
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTC 61590
||||| | || | ||||| ||||| ||||||
Sbjct 742662 AAGAAGAGAGGTTTGATGCCAGGTCTTACCTTC 742694
>seq16
Length=109755
Score = 86.0 bits (94), Expect = 5e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 9146 TTTGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCA 9205
|||||| || || ||||| ||||| ||| |||||||||||||| ||| |||||||| |
Sbjct 14751 TTTGGGTCCTATCTACGGATTCCAATGGAGACATTTCGGTGCTAAGTATGTCGATTGTGA 14810
Query 9206 TACGGACTATACGGGCCAAGGTGTGGATCA 9235
||| |||||||| || ||||| | |||||
Sbjct 14811 TACCGACTATACCGGACAAGGATTTGATCA 14840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567631752640
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