Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq350 708 0.0
>seq350
Length=11893
Score = 708 bits (784), Expect = 0.0
Identities = 565/670 (84%), Gaps = 19/670 (3%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 6214 TGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 6155
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 6154 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 6095
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 6094 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 6035
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262
| | |||||||| | | || ||| | | | | |||| |||| |||||
Sbjct 6034 GAGATCAGACTTG---GTATTTTG-CAAGTTACTCTTTCGGGGGTGGCCTCT---GCGGT 5982
Query 263 ----CAGGCCAGCATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CT 316
| |||||||||| | | || ||||| |||||| ||| ||||||||||| | ||
Sbjct 5981 TTACCGGGCCAGCATCGGTTTGGAGCGGTAGGATAATGGCGG-GGGAATGTGGCACGACT 5923
Query 317 TCGGGGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375
| || | ||||||||||| | | || | ||| |||| ||| |||| | ||| |
Sbjct 5922 TTGGTTGTGTGTTATAGCCTCTGACG--ATACTGCCAGCCTAGACCGAGGACTGCGGTTT 5865
Query 376 GG--CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433
|||||||| |||| ||||| | |||| |||||||||| ||||||||||||||||
Sbjct 5864 TTACCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAG 5805
Query 434 TCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAG 493
|||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||
Sbjct 5804 TCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGAAG 5745
Query 494 GTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553
|||| || || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 5744 ATGGGGGCCTGTATGGGTGCACCATCGACCGATCCTGATGTGTTCGGATGGATTTGAGTA 5685
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5684 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 5625
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||
Sbjct 5624 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 5565
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 5564 ATAGGGGCGA 5555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079983311900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |