Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq350 708 0.0 >seq350 Length=11893 Score = 708 bits (784), Expect = 0.0 Identities = 565/670 (84%), Gaps = 19/670 (3%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 6214 TGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 6155 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 6154 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 6095 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 6094 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 6035 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | | |||||||| | | || ||| | | | | |||| |||| ||||| Sbjct 6034 GAGATCAGACTTG---GTATTTTG-CAAGTTACTCTTTCGGGGGTGGCCTCT---GCGGT 5982 Query 263 ----CAGGCCAGCATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CT 316 | |||||||||| | | || ||||| |||||| ||| ||||||||||| | || Sbjct 5981 TTACCGGGCCAGCATCGGTTTGGAGCGGTAGGATAATGGCGG-GGGAATGTGGCACGACT 5923 Query 317 TCGGGGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375 | || | ||||||||||| | | || | ||| |||| ||| |||| | ||| | Sbjct 5922 TTGGTTGTGTGTTATAGCCTCTGACG--ATACTGCCAGCCTAGACCGAGGACTGCGGTTT 5865 Query 376 GG--CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433 |||||||| |||| ||||| | |||| |||||||||| |||||||||||||||| Sbjct 5864 TTACCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAG 5805 Query 434 TCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAG 493 |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct 5804 TCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGAAG 5745 Query 494 GTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 |||| || || ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 5744 ATGGGGGCCTGTATGGGTGCACCATCGACCGATCCTGATGTGTTCGGATGGATTTGAGTA 5685 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5684 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 5625 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct 5624 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 5565 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 5564 ATAGGGGCGA 5555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079983311900