Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq22 141 7e-29 seq30 118 8e-22 >seq22 Length=82586 Score = 141 bits (156), Expect = 7e-29 Identities = 469/717 (65%), Gaps = 23/717 (3%) Strand=Plus/Plus Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 |||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| |||| Sbjct 8778 GTGTTGGCATTCTTTGCTGCCTCGGATGGTATTGTCAATGAGAACTTGGTGGAAAATTTC 8837 Query 61267 -GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325 | || | || | ||| | | ||||| | | ||| || ||||| ||||| Sbjct 8838 TGTGCTGAAG-TACAAATACCAGAGGCTCAACTGGTATACAAGTTTCAGATCATGATGGA 8896 Query 61326 GAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 || |||| || |||| || | |||| ||||| || ||| ||| ||| | | Sbjct 8897 AAACATCCATTCAGAGACTTATTCGTTGTTA--ATCGAAACATACTTCAAGGACCCAGAA 8954 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGC 61439 ||| || ||||| ||||| || || | || || | | ||| ||||| Sbjct 8955 GAAGCGGACTTTTTGTTTAATGCTATTGAAAATATCCCATTCATCAGAGAA----AAAGC 9010 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTG 61497 ||||||||| ||| ||||| || || | | ||| | || ||| ||||| | Sbjct 9011 CGATTGGGCCATCAGGTGGATT--CAAGACGAGGATGCTTTGTATGCTGAGAGATTGGTT 9068 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || || ||| ||||||||||||| |||||||| ||||| || ||||| Sbjct 9069 GCGTTTGCTGCCGTTGAAGGTATATTTTTCAGTGGTTCGTTTGCAGCAATTTTCTGGTTA 9128 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 |||||| | || | ||||| || |||| || ||||| ||||| | || ||||| Sbjct 9129 AAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCGAATGAATTGATTTGCCGAGACGAA 9188 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || || || |||| ||| |||| ||||| || ||| | |||| || || Sbjct 9189 GGGATTCACACGGATTATGCCTGTTTGTTATTC--TCG-TATTTAAAGAATAAACCTTCT 9245 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || | | | || || ||||| || ||||| || | ||| | | | Sbjct 9246 CCAGAAATCATTGAGAAAATCATTACCGAGGCTGTGACTATTGAGAAAAAATATTTCAGC 9305 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || | || || || | | || |||||||||| | |||| |||||| ||||| Sbjct 9306 GATGCGCTTCCAGTATCTTTATTGGGAATGAATTGTGACTTGATGTGCCAGTATGTTGAA 9365 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 |||||||| || || | || || | ||||| || || | || || ||| | || Sbjct 9366 TTTGTTGCTGATCGATTATTAGTGGCCTTTGGAAATAAAAAGTAT-TACAATGTTACTAA 9424 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||||||||| ||||| | || || ||| ||| || || ||||| || || || Sbjct 9425 TCCATTTGATTTTATGGAAAATATCTCATTGGCTGGTAAAACTAATTTCTTTGAAAA 9481 >seq30 Length=68702 Score = 118 bits (130), Expect = 8e-22 Identities = 170/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC--GTGCTCGTT 66389 ||||| |||||| | || |||||||| | | || || | ||| | || ||| || Sbjct 1427 ACACGTTTCATAAACAAGTCGGGTATCCATAATCCATAAAACAAATCTCTAGTTCTCATT 1368 Query 66390 GCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 || ||| | ||||||||||| | || || | || ||||| || || ||||||||| Sbjct 1367 TCT--TCATTCCCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATG 1310 Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509 |||| | || ||||| || | || |||||| || |||||||| ||||| || | | Sbjct 1309 GTTCTATATATATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTG 1250 Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | ||| ||| | ||||||||||| ||||| | |||||| || | ||||||||||| Sbjct 1249 CAGTATTATTGTAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCC 1192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564230309920