Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 147 2e-30 seq31 118 8e-22 >seq2 Length=135431 Score = 147 bits (162), Expect = 2e-30 Identities = 470/717 (66%), Gaps = 23/717 (3%) Strand=Plus/Minus Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 |||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| |||| Sbjct 60085 GTGTTGGCATTCTTTGCTGCCTCGGATGGTATTGTCAATGAGAACTTGGTGGAAAATTTC 60026 Query 61267 -GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325 | || | || | ||| | | ||||| | | ||| || ||||| ||||| Sbjct 60025 TGTGCTGAAG-TACAAATACCAGAGGCTCAACTGGTATACAAGTTTCAGATCATGATGGA 59967 Query 61326 GAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 || |||| || |||| || | |||| ||||| || ||| ||| ||| | | Sbjct 59966 AAACATCCATTCAGAGACTTATTCGTTGTTA--ATCGAAACATACTTCAAGGACCCAGAA 59909 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGC 61439 ||| || ||||| ||||| || || | || || | | ||| ||||| Sbjct 59908 GAAGCGGACTTTTTGTTTAATGCTATTGAAAATATCCCATTCATCAGAGAA----AAAGC 59853 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTG 61497 ||||||||| ||| ||||| || || | | ||| | || ||| ||||| | Sbjct 59852 CGATTGGGCCATCAGGTGGATT--CAAGACGAGGATGCTTTGTATGCTGAGAGATTGGTT 59795 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || || ||| ||||||||||||| |||||||| ||||| || ||||| Sbjct 59794 GCGTTTGCTGCCGTTGAAGGTATATTTTTCAGTGGTTCGTTTGCAGCAATTTTCTGGTTA 59735 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 |||||| | || | ||||| || |||| || ||||| ||||| | || ||||| Sbjct 59734 AAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCGAATGAATTGATTTGCCGAGACGAA 59675 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || || || |||| ||| |||| ||||| || ||| | |||| || || Sbjct 59674 GGGATTCACACGGATTATGCCTGTTTGTTATTC--TCG-TATTTAAAGAATAAACCTTCT 59618 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || | | | || || ||||| || ||||| || | ||| | | | Sbjct 59617 CCAGAAATCATTGAGAAAATCATTACCGAGGCTGTGACTATTGAGAAAAAATATTTCAGC 59558 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || | || || || | | || |||||||||| | |||| |||||| ||||| Sbjct 59557 GATGCGCTTCCAGTATCTTTATTGGGAATGAATTGTGACTTGATGTGCCAGTATGTTGAA 59498 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 |||||||| || || | || || | ||||| || || | || || ||| | || Sbjct 59497 TTTGTTGCTGATCGATTATTAGTGGCCTTTGGAAATAAAAAGTAT-TACAATGTTACTAA 59439 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||||||||||||||| | || || ||| ||| || || ||||| || || || Sbjct 59438 TCCATTTGATTTCATGGAAAATATCTCCTTGGCTGGTAAAACTAATTTCTTTGAAAA 59382 >seq31 Length=62326 Score = 118 bits (130), Expect = 8e-22 Identities = 170/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC--GTGCTCGTT 66389 ||||| |||||| | || |||||||| | | || || | ||| | || ||| || Sbjct 1418 ACACGTTTCATAAACAAGTCGGGTATCCATAATCCATAAAACAAATCTCTAGTTCTCATT 1359 Query 66390 GCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 || ||| | ||||||||||| | || || | || ||||| || || ||||||||| Sbjct 1358 TCT--TCATTCCCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATG 1301 Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509 |||| | || ||||| || | || |||||| || |||||||| ||||| || | | Sbjct 1300 GTTCTATATATATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTG 1241 Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | ||| ||| | ||||||||||| ||||| | |||||| || | ||||||||||| Sbjct 1240 CAGTATTATTGTAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCC 1183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563677938880