Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2 147 2e-30
seq31 118 8e-22
>seq2
Length=135431
Score = 147 bits (162), Expect = 2e-30
Identities = 470/717 (66%), Gaps = 23/717 (3%)
Strand=Plus/Minus
Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266
|||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| ||||
Sbjct 60085 GTGTTGGCATTCTTTGCTGCCTCGGATGGTATTGTCAATGAGAACTTGGTGGAAAATTTC 60026
Query 61267 -GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325
| || | || | ||| | | ||||| | | ||| || ||||| |||||
Sbjct 60025 TGTGCTGAAG-TACAAATACCAGAGGCTCAACTGGTATACAAGTTTCAGATCATGATGGA 59967
Query 61326 GAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|| |||| || |||| || | |||| ||||| || ||| ||| ||| | |
Sbjct 59966 AAACATCCATTCAGAGACTTATTCGTTGTTA--ATCGAAACATACTTCAAGGACCCAGAA 59909
Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGC 61439
||| || ||||| ||||| || || | || || | | ||| |||||
Sbjct 59908 GAAGCGGACTTTTTGTTTAATGCTATTGAAAATATCCCATTCATCAGAGAA----AAAGC 59853
Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTG 61497
||||||||| ||| ||||| || || | | ||| | || ||| ||||| |
Sbjct 59852 CGATTGGGCCATCAGGTGGATT--CAAGACGAGGATGCTTTGTATGCTGAGAGATTGGTT 59795
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || || ||| ||||||||||||| |||||||| ||||| || |||||
Sbjct 59794 GCGTTTGCTGCCGTTGAAGGTATATTTTTCAGTGGTTCGTTTGCAGCAATTTTCTGGTTA 59735
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
|||||| | || | ||||| || |||| || ||||| ||||| | || |||||
Sbjct 59734 AAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCGAATGAATTGATTTGCCGAGACGAA 59675
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677
|| || || |||| ||| |||| ||||| || ||| | |||| || ||
Sbjct 59674 GGGATTCACACGGATTATGCCTGTTTGTTATTC--TCG-TATTTAAAGAATAAACCTTCT 59618
Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
|| | | | || || ||||| || ||||| || | ||| | | |
Sbjct 59617 CCAGAAATCATTGAGAAAATCATTACCGAGGCTGTGACTATTGAGAAAAAATATTTCAGC 59558
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
|| || | || || || | | || |||||||||| | |||| |||||| |||||
Sbjct 59557 GATGCGCTTCCAGTATCTTTATTGGGAATGAATTGTGACTTGATGTGCCAGTATGTTGAA 59498
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|||||||| || || | || || | ||||| || || | || || ||| | ||
Sbjct 59497 TTTGTTGCTGATCGATTATTAGTGGCCTTTGGAAATAAAAAGTAT-TACAATGTTACTAA 59439
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
||||||||||||||||| | || || ||| ||| || || ||||| || || ||
Sbjct 59438 TCCATTTGATTTCATGGAAAATATCTCCTTGGCTGGTAAAACTAATTTCTTTGAAAA 59382
>seq31
Length=62326
Score = 118 bits (130), Expect = 8e-22
Identities = 170/238 (71%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC--GTGCTCGTT 66389
||||| |||||| | || |||||||| | | || || | ||| | || ||| ||
Sbjct 1418 ACACGTTTCATAAACAAGTCGGGTATCCATAATCCATAAAACAAATCTCTAGTTCTCATT 1359
Query 66390 GCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449
|| ||| | ||||||||||| | || || | || ||||| || || |||||||||
Sbjct 1358 TCT--TCATTCCCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATG 1301
Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509
|||| | || ||||| || | || |||||| || |||||||| ||||| || | |
Sbjct 1300 GTTCTATATATATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTG 1241
Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567
| ||| ||| | ||||||||||| ||||| | |||||| || | |||||||||||
Sbjct 1240 CAGTATTATTGTAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCC 1183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563677938880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |