Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 seq4 125 6e-24 >seq1 Length=2936865 Score = 170 bits (188), Expect = 2e-37 Identities = 585/897 (65%), Gaps = 20/897 (2%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || ||| ||||||| | ||||||| || |||| || ||| || | || Sbjct 2539370 GAACCACTTTTGAAAGAGAACACACGTCGTTATGTCATGTTTCCAATCAGATACCATGAA 2539429 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| || || || ||||| |||||||| | || || ||||||| Sbjct 2539430 ATCTGGCAAATGTACAAGAAAGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTTA 2539489 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTA-TCGAGCGGTGAACAACATTTCATTA---- 61201 ||||| | |||| ||| || | | | | || | | ||| |||| ||| Sbjct 2539490 GGTAAAGATCTTCATGATTGG-AGAGAAAAATTAAACGATAATGAACGTTTCTTTATCGG 2539548 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA- 61260 || | | ||||| ||||||||||| || || ||||| || |||||||| || ||||| Sbjct 2539549 AAGAA-TCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGAAA 2539607 Query 61261 -CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 | |||| || | || | ||| | | || || | ||||||||| ||||| ||| Sbjct 2539608 ACTTTTCA-GCTGAAGTT-CAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTAT 2539665 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 ||||| || | ||||| || | ||| | | || || || || |||| ||| | Sbjct 2539666 GATGGAAAACATTCACTCAGAAACTTACTCATTATTGATTGAAACTTATATCAAGGATCC 2539725 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 ||| ||| || |||||||| || || || || || | || ||| || Sbjct 2539726 AAAAGAAGCTGACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAGAAGGC 2539785 Query 61440 GGATTGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAACGATTGCTGG 61498 ||||||||| ||| |||||| | || | | ||| |||| || ||||| | | Sbjct 2539786 TGATTGGGCCATCAGATGGATC-CAAGATTCCGAGGCATTGTTTGCCGAGAGATTGGTTG 2539844 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | || || | || || ||| | ||||||||||| || ||||| | || || ||||||| Sbjct 2539845 CTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTGA 2539904 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 ||||| | || | ||||| || | || ||| ||| || || || | || ||||| | Sbjct 2539905 AGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAG 2539964 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC--GTC 61676 | | || ||| ||||| ||| |||| | || | || | || || Sbjct 2539965 GTTTACACACTGACTTTGCATGTTTATTATT---TGCCCATTTACAACATAGACCAGATC 2540021 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 | || ||| || || ||| || ||| || || || ||| | ||||| | || Sbjct 2540022 CAAAGATCGT-TGAAAGA-ATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTAC 2540079 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 ||| ||||| || || | | || ||||||||| | |||||| || ||| |||| Sbjct 2540080 TGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTGA 2540139 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 ||||||||| || | | ||||| | |||||||| || | || ||| | || Sbjct 2540140 ATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTAA 2540199 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| ||||| ||||| | ||||| ||| ||| ||||| ||||| || || || Sbjct 2540200 TCCATTCGATTTTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGAAAA 2540256 >seq4 Length=1591921 Score = 125 bits (138), Expect = 6e-24 Identities = 217/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 66310 CGACCAATCACCATCCTGTTCT-ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 |||||||||| | ||||| | | || | |||| || | ||| || ||||| | | | Sbjct 907292 CGACCAATCATC-TCCTGATTTCACTCTTTGCATGAACAAATCTGGAATCCATAACCCAT 907234 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428 |||| | ||| | | ||| | || ||| ||||||||||||| | || | | | | Sbjct 907233 AGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGT 907174 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 |||||||||| |||||||| ||||||| ||||| || || | || | ||| || | Sbjct 907173 CAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTC 907114 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 | |||||||| || || || ||| |||||||| || |||||||| || || | ||| Sbjct 907113 CGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAACATGGGAACTACCCCAC 907054 Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608 |||| | ||||| || | ||| | |||||| | || | |||| ||||| || | Sbjct 907053 CAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTGATATTGTGAATATGGA 906994 Query 66609 GACCAATACCACC 66621 ||||| ||||| Sbjct 906993 TCCCAATCCCACC 906981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567961237120