Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 170 2e-37
seq4 125 6e-24
>seq1
Length=2936865
Score = 170 bits (188), Expect = 2e-37
Identities = 585/897 (65%), Gaps = 20/897 (2%)
Strand=Plus/Plus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || ||| ||||||| | ||||||| || |||| || ||| || | ||
Sbjct 2539370 GAACCACTTTTGAAAGAGAACACACGTCGTTATGTCATGTTTCCAATCAGATACCATGAA 2539429
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| || || || ||||| |||||||| | || || |||||||
Sbjct 2539430 ATCTGGCAAATGTACAAGAAAGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTTA 2539489
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTA-TCGAGCGGTGAACAACATTTCATTA---- 61201
||||| | |||| ||| || | | | | || | | ||| |||| |||
Sbjct 2539490 GGTAAAGATCTTCATGATTGG-AGAGAAAAATTAAACGATAATGAACGTTTCTTTATCGG 2539548
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA- 61260
|| | | ||||| ||||||||||| || || ||||| || |||||||| || |||||
Sbjct 2539549 AAGAA-TCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGAAA 2539607
Query 61261 -CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319
| |||| || | || | ||| | | || || | ||||||||| ||||| |||
Sbjct 2539608 ACTTTTCA-GCTGAAGTT-CAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTAT 2539665
Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379
||||| || | ||||| || | ||| | | || || || || |||| ||| |
Sbjct 2539666 GATGGAAAACATTCACTCAGAAACTTACTCATTATTGATTGAAACTTATATCAAGGATCC 2539725
Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439
||| ||| || |||||||| || || || || || | || ||| ||
Sbjct 2539726 AAAAGAAGCTGACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAGAAGGC 2539785
Query 61440 GGATTGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAACGATTGCTGG 61498
||||||||| ||| |||||| | || | | ||| |||| || ||||| | |
Sbjct 2539786 TGATTGGGCCATCAGATGGATC-CAAGATTCCGAGGCATTGTTTGCCGAGAGATTGGTTG 2539844
Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558
| || || | || || ||| | ||||||||||| || ||||| | || || |||||||
Sbjct 2539845 CTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTGA 2539904
Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618
||||| | || | ||||| || | || ||| ||| || || || | || ||||| |
Sbjct 2539905 AGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAG 2539964
Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC--GTC 61676
| | || ||| ||||| ||| |||| | || | || | || ||
Sbjct 2539965 GTTTACACACTGACTTTGCATGTTTATTATT---TGCCCATTTACAACATAGACCAGATC 2540021
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
| || ||| || || ||| || ||| || || || ||| | ||||| | ||
Sbjct 2540022 CAAAGATCGT-TGAAAGA-ATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTAC 2540079
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
||| ||||| || || | | || ||||||||| | |||||| || ||| ||||
Sbjct 2540080 TGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTGA 2540139
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
||||||||| || | | ||||| | |||||||| || | || ||| | ||
Sbjct 2540140 ATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTAA 2540199
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
||||| ||||| ||||| | ||||| ||| ||| ||||| ||||| || || ||
Sbjct 2540200 TCCATTCGATTTTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGAAAA 2540256
>seq4
Length=1591921
Score = 125 bits (138), Expect = 6e-24
Identities = 217/313 (69%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 66310 CGACCAATCACCATCCTGTTCT-ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368
|||||||||| | ||||| | | || | |||| || | ||| || ||||| | | |
Sbjct 907292 CGACCAATCATC-TCCTGATTTCACTCTTTGCATGAACAAATCTGGAATCCATAACCCAT 907234
Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428
|||| | ||| | | ||| | || ||| ||||||||||||| | || | | | |
Sbjct 907233 AGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGT 907174
Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488
|||||||||| |||||||| ||||||| ||||| || || | || | ||| || |
Sbjct 907173 CAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTC 907114
Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548
| |||||||| || || || ||| |||||||| || |||||||| || || | |||
Sbjct 907113 CGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAACATGGGAACTACCCCAC 907054
Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608
|||| | ||||| || | ||| | |||||| | || | |||| ||||| || |
Sbjct 907053 CAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTGATATTGTGAATATGGA 906994
Query 66609 GACCAATACCACC 66621
||||| |||||
Sbjct 906993 TCCCAATCCCACC 906981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567961237120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |