Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq69 188 6e-43 seq35 125 6e-24 >seq69 Length=709337 Score = 188 bits (208), Expect = 6e-43 Identities = 590/898 (66%), Gaps = 22/898 (2%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || ||| ||||||| | ||||||| || |||| || ||| || | || Sbjct 557865 GAACCACTTTTGAAAGAGAACACACGTCGTTATGTCATGTTTCCAATCAGATACCATGAA 557924 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || ||||| |||||||| | || || ||||||| Sbjct 557925 ATCTGGCAAATGTACAAGAAGGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTTA 557984 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTA-TCGAGCGGTGAACAACATTTCATTA---- 61201 ||||| | |||| ||| || | | | | || | | ||| |||| ||| Sbjct 557985 GGTAAAGATCTTCATGATTGG-AGAGAAAAATTAAACGATAATGAACGTTTCTTTATCGG 558043 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA- 61260 || | | ||||| ||||||||||| || || ||||| || ||||| || || ||||| Sbjct 558044 AAGAA-TCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAAAACTTGGTGGAAA 558102 Query 61261 -CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 | |||| || | || | ||| | | || || | ||||||||| ||||| ||| Sbjct 558103 ACTTTTCA-GCTGAAGTT-CAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTAT 558160 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 ||||| || | ||||| || | ||| | | || || || ||||||| ||| | Sbjct 558161 GATGGAAAACATTCACTCAGAAACTTACTCGTTATTGATTGAAACTTACATCAAGGATCC 558220 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 ||| ||| || |||||||| || || || || ||| | || ||| || Sbjct 558221 AAAAGAAGCTGACTTTTTATTCAATGCTATTGAAACCATTCCGCAAATTAAAAAGAAGGC 558280 Query 61440 GGATTGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAACGATTGCTGG 61498 ||||||||| ||| |||||| | || | | ||| |||| ||| ||||| | | Sbjct 558281 TGATTGGGCCATCAGATGGATC-CAAGATTCCGAGGCATTGTTTGCTGAGAGATTGGTTG 558339 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | || || | || || ||| | ||||||||||| || ||||| | || || ||||||| Sbjct 558340 CTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTGA 558399 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 ||||| | || | ||||| || | || ||| ||| || || || | || ||||| | Sbjct 558400 AGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAG 558459 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCC--GT 61675 | | || |||||| || ||| |||| ||| || | || | || | Sbjct 558460 GTTTACACACTGATTTCGCATGTTTATTATT----TGCTCATTTACAACATAGACCAGAT 558515 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | | || ||| || || ||| || ||| || || || ||| | ||||| | | Sbjct 558516 CCAAAGATCGT-TGAAAGA-ATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTA 558573 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| ||||| || || | | || ||||||||| | |||||| || ||| | | Sbjct 558574 CTGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTCG 558633 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 |||||||||| || | | ||||| | |||||||| || | || ||| | | Sbjct 558634 AATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTA 558693 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 | ||||||||||| ||||| | ||||| ||| ||| ||||| ||||| || || || Sbjct 558694 ATCCATTTGATTTTATGGAAAACATTTCCTTGGCTGGGAAGACCAATTTCTTTGAAAA 558751 >seq35 Length=214301 Score = 125 bits (138), Expect = 6e-24 Identities = 217/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 66310 CGACCAATCACCATCCTGTTCT-ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 |||||||||| | ||||| | | || | |||| || | ||| || ||||| | | | Sbjct 164964 CGACCAATCATC-TCCTGATTTCACTCTTTGCATGAACAAATCTGGAATCCATAACCCAT 164906 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428 |||| | ||| | | ||| | || ||| ||||||||||||| | || | | | | Sbjct 164905 AGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGT 164846 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 |||||||||| |||||||| ||||||| ||||| || || | || | ||| || | Sbjct 164845 CAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTC 164786 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 | |||||||| || || || ||| |||||||| || |||||||| || || | ||| Sbjct 164785 CGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAACATGGGAACTACCCCAC 164726 Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608 |||| | ||||| || | ||| | |||||| | || | |||| ||||| || | Sbjct 164725 CAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTGATATTGTGAATATGGA 164666 Query 66609 GACCAATACCACC 66621 ||||| ||||| Sbjct 164665 TCCCAATCCCACC 164653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567321649600