Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq69 188 6e-43
seq35 125 6e-24
>seq69
Length=709337
Score = 188 bits (208), Expect = 6e-43
Identities = 590/898 (66%), Gaps = 22/898 (2%)
Strand=Plus/Plus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || ||| ||||||| | ||||||| || |||| || ||| || | ||
Sbjct 557865 GAACCACTTTTGAAAGAGAACACACGTCGTTATGTCATGTTTCCAATCAGATACCATGAA 557924
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || ||||| |||||||| | || || |||||||
Sbjct 557925 ATCTGGCAAATGTACAAGAAGGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTTA 557984
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTA-TCGAGCGGTGAACAACATTTCATTA---- 61201
||||| | |||| ||| || | | | | || | | ||| |||| |||
Sbjct 557985 GGTAAAGATCTTCATGATTGG-AGAGAAAAATTAAACGATAATGAACGTTTCTTTATCGG 558043
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA- 61260
|| | | ||||| ||||||||||| || || ||||| || ||||| || || |||||
Sbjct 558044 AAGAA-TCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAAAACTTGGTGGAAA 558102
Query 61261 -CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319
| |||| || | || | ||| | | || || | ||||||||| ||||| |||
Sbjct 558103 ACTTTTCA-GCTGAAGTT-CAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTAT 558160
Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379
||||| || | ||||| || | ||| | | || || || ||||||| ||| |
Sbjct 558161 GATGGAAAACATTCACTCAGAAACTTACTCGTTATTGATTGAAACTTACATCAAGGATCC 558220
Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439
||| ||| || |||||||| || || || || ||| | || ||| ||
Sbjct 558221 AAAAGAAGCTGACTTTTTATTCAATGCTATTGAAACCATTCCGCAAATTAAAAAGAAGGC 558280
Query 61440 GGATTGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAACGATTGCTGG 61498
||||||||| ||| |||||| | || | | ||| |||| ||| ||||| | |
Sbjct 558281 TGATTGGGCCATCAGATGGATC-CAAGATTCCGAGGCATTGTTTGCTGAGAGATTGGTTG 558339
Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558
| || || | || || ||| | ||||||||||| || ||||| | || || |||||||
Sbjct 558340 CTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTGA 558399
Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618
||||| | || | ||||| || | || ||| ||| || || || | || ||||| |
Sbjct 558400 AGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAG 558459
Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCC--GT 61675
| | || |||||| || ||| |||| ||| || | || | || |
Sbjct 558460 GTTTACACACTGATTTCGCATGTTTATTATT----TGCTCATTTACAACATAGACCAGAT 558515
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
| | || ||| || || ||| || ||| || || || ||| | ||||| | |
Sbjct 558516 CCAAAGATCGT-TGAAAGA-ATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTA 558573
Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795
|||| ||||| || || | | || ||||||||| | |||||| || ||| | |
Sbjct 558574 CTGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTCG 558633
Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855
|||||||||| || | | ||||| | |||||||| || | || ||| | |
Sbjct 558634 AATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTA 558693
Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
| ||||||||||| ||||| | ||||| ||| ||| ||||| ||||| || || ||
Sbjct 558694 ATCCATTTGATTTTATGGAAAACATTTCCTTGGCTGGGAAGACCAATTTCTTTGAAAA 558751
>seq35
Length=214301
Score = 125 bits (138), Expect = 6e-24
Identities = 217/313 (69%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 66310 CGACCAATCACCATCCTGTTCT-ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368
|||||||||| | ||||| | | || | |||| || | ||| || ||||| | | |
Sbjct 164964 CGACCAATCATC-TCCTGATTTCACTCTTTGCATGAACAAATCTGGAATCCATAACCCAT 164906
Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428
|||| | ||| | | ||| | || ||| ||||||||||||| | || | | | |
Sbjct 164905 AGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGT 164846
Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488
|||||||||| |||||||| ||||||| ||||| || || | || | ||| || |
Sbjct 164845 CAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTC 164786
Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548
| |||||||| || || || ||| |||||||| || |||||||| || || | |||
Sbjct 164785 CGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAACATGGGAACTACCCCAC 164726
Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608
|||| | ||||| || | ||| | |||||| | || | |||| ||||| || |
Sbjct 164725 CAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTGATATTGTGAATATGGA 164666
Query 66609 GACCAATACCACC 66621
||||| |||||
Sbjct 164665 TCCCAATCCCACC 164653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567321649600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |