Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 >seq4 Length=3023470 Score = 140 bits (154), Expect = 3e-28 Identities = 580/899 (65%), Gaps = 22/899 (2%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || ||| | || || ||||||| || |||| || || || | || Sbjct 2626021 GAACCACTTTTGAAGGAAAACAAACGTCGTTATGTCATGTTTCCTATTAGATACCATGAA 2626080 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| ||||| || |||||||| | || || | ||||| Sbjct 2626081 ATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGATTTA 2626140 Query 61147 TCCAAAGACATGAATGACTGG-GAGCG---TTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| | |||| ||| ||| | || | || | |||| ||||||| Sbjct 2626141 GGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGA-CAATGAAAGGTTTTTCATTGG 2626199 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA-- 61260 | | ||||| || || || || || || ||||| || ||||| || || ||||| Sbjct 2626200 AAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAAAA 2626259 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | |||| || | || | ||| | | || || | || || || ||||| || Sbjct 2626260 CTTTTCT-GCTGAAGTT-CAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATG 2626317 Query 61321 ATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||| || | || || || | || || | || || || || || |||| ||| | Sbjct 2626318 ATGGAAAACATTCATTCAGAAACTTATTCATTATTG--ATTGAAACTTATATCAAGGATC 2626375 Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 |||| || || |||||||| || || || || || | || ||| | Sbjct 2626376 CAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAGG 2626435 Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 | ||||||||| ||| ||||| || | | | | | | |||| ||| ||||| | Sbjct 2626436 CTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTG-TTTGCTGAGAGATTGGTT 2626494 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | |||||||||||||||||||| | || || |||||| Sbjct 2626495 GCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTG 2626554 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| | ||| | ||||| || ||||||| |||||| ||||| | || || || Sbjct 2626555 AAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGAA 2626614 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCC-GT 61675 || | || ||||||||| ||| | || ||| || | || | || | Sbjct 2626615 GGTTTACACACTGATTTTGCATGCTTGTTGTT----TGCTCATTTACAACATAGACCTGA 2626670 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | | || ||| | ||| || ||| || || || ||| | ||||| | | Sbjct 2626671 CCCA-AAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTA 2626729 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| || ||||| || | | || ||||||||| | |||| || ||| ||| Sbjct 2626730 CTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTG 2626789 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 |||||||||||||| | | ||||| | |||||||| || | || ||| | | Sbjct 2626790 AATTTGTTGCCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAGTTTACAATGTCACCA 2626849 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 | ||||||||||| ||||| | || || ||| ||| ||||| ||||| || || ||| Sbjct 2626850 ATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAAA 2626908 Score = 105 bits (116), Expect = 5e-18 Identities = 210/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 ||||||||||| | | ||| | ||||||| | |||||| ||||| | | || Sbjct 920576 GACCAATCACCGCCGGACTTTACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAA 920517 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 || | ||| | | || ||| || | || ||||| || | || || | | |||| Sbjct 920516 AACAAATCCCTCGTACGAAACTCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCA 920457 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 || | ||||||||||| || |||| |||||| ||||| | || | |||||| ||| Sbjct 920456 AACACATCGGCATGCCAAGGCTCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCA 920397 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 |||||||| || || || || |||||||| || || ||||| || || | || Sbjct 920396 CCTTGGTCAACATATCGGGCAGTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCT 920337 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 | | | |||||||||| | | || | || ||| | |||| |||| ||||| || | Sbjct 920336 GCTCTTCCATTGGTGCTGGCTATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATT 920277 Query 66611 CCAATACCACC 66621 |||||||| || Sbjct 920276 CCAATACCGCC 920266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567956391760