Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5 699 0.0 >seq5 Length=383113 Score = 699 bits (774), Expect = 0.0 Identities = 564/668 (84%), Gaps = 14/668 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 328934 TGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 328875 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 328874 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 328815 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 328814 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 328755 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | | |||||||| | | || | | ||||| |||| |||| | | Sbjct 328754 GAGATCAGACTTG---GTATTTTGTATGTTACTCTCTCGGG-GGTGGCCTCTACAGTTTA 328699 Query 263 CAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGG 320 | || |||||||||| | | ||||| |||||| || | |||||||| | |||||| Sbjct 328698 CCGGGCCAGCATCAGTTTGAGCGGTAGGATAAGTGCAAAGA-AATGTGGCACTGCTTCGG 328640 Query 321 GGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG-CTCCGGC 378 | ||||||||| | | | || | ||| || | |||||||| | ||| || |||| Sbjct 328639 TAGTGTGTTATAGTCTTTGTCG--ATACTGCCAGCTTAGACTGAGGACTGCGGCTTCGGC 328582 Query 379 -TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 ||||||| |||| ||||| | |||| |||||||||| |||||||||||||||||||| Sbjct 328581 CTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTA 328522 Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 || ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||| | Sbjct 328521 ACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTAG 328462 Query 498 GAAC-CCGTGAGG-GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 || | || | ||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 328461 GACCTCCTTTAGGAGTGCACTATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 328402 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 328401 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 328342 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||| Sbjct 328341 AAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTAT 328282 Query 676 AGGGGCGA 683 |||||||| Sbjct 328281 AGGGGCGA 328274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999206350