Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq37 140 3e-28
>seq37
Length=3023111
Score = 140 bits (154), Expect = 3e-28
Identities = 580/899 (65%), Gaps = 22/899 (2%)
Strand=Plus/Plus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || ||| | || || ||||||| || |||| || || || | ||
Sbjct 2626702 GAACCACTTTTGAAGGAAAACAAACGTCGTTATGTCATGTTTCCTATTAGATACCATGAA 2626761
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| ||||| ||||| || |||||||| | || || | |||||
Sbjct 2626762 ATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGATTTA 2626821
Query 61147 TCCAAAGACATGAATGACTGG-GAGCG---TTTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| | |||| ||| ||| | || | || | |||| |||||||
Sbjct 2626822 GGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGA-CAATGAAAGGTTTTTCATTGG 2626880
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA-- 61260
| | ||||| || || || || || || ||||| || ||||| || || |||||
Sbjct 2626881 AAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAAAA 2626940
Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| |||| || | || | ||| | | || || | || || || ||||| ||
Sbjct 2626941 CTTTTCT-GCTGAAGTT-CAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATG 2626998
Query 61321 ATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||| || | || || || | || || | || || || || || |||| ||| |
Sbjct 2626999 ATGGAAAACATTCATTCAGAAACTTATTCATTATTG--ATTGAAACTTATATCAAGGATC 2627056
Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438
|||| || || |||||||| || || || || || | || ||| |
Sbjct 2627057 CAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAGG 2627116
Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497
| ||||||||| ||| ||||| || | | | | | | |||| ||| ||||| |
Sbjct 2627117 CTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTG-TTTGCTGAGAGATTGGTT 2627175
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || |||||| | |||||||||||||||||||| | || || ||||||
Sbjct 2627176 GCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTG 2627235
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| | ||| | ||||| || ||||||| |||||| ||||| | || || ||
Sbjct 2627236 AAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGAA 2627295
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCC-GT 61675
|| | || ||||||||| ||| | || ||| || | || | || |
Sbjct 2627296 GGTTTACACACTGATTTTGCATGCTTGTTGTT----TGCTCATTTACAACATAGACCTGA 2627351
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
| | || ||| | ||| || ||| || || || ||| | ||||| | |
Sbjct 2627352 CCCA-AAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTA 2627410
Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795
|||| || ||||| || | | || ||||||||| | |||| || ||| |||
Sbjct 2627411 CTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTG 2627470
Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855
|||||||||||||| | | ||||| | |||||||| || | || ||| | |
Sbjct 2627471 AATTTGTTGCCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAGTTTACAATGTCACCA 2627530
Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914
| ||||||||||| ||||| | || || ||| ||| ||||| ||||| || || |||
Sbjct 2627531 ATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAAA 2627589
Score = 105 bits (116), Expect = 5e-18
Identities = 210/311 (68%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370
||||||||||| | | ||| | ||||||| | |||||| ||||| | | ||
Sbjct 920531 GACCAATCACCGCCGGACTTTACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAA 920472
Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430
|| | ||| | | || ||| || | || ||||| || | || || | | ||||
Sbjct 920471 AACAAATCCCTCGTACGAAACTCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCA 920412
Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490
|| | ||||||||||| || |||| |||||| ||||| | || | |||||| |||
Sbjct 920411 AACACATCGGCATGCCAAGGCTCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCA 920352
Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550
|||||||| || || || || |||||||| || || ||||| || || | ||
Sbjct 920351 CCTTGGTCAACATATCGGGCAGTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCT 920292
Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610
| | | |||||||||| | | || | || ||| | |||| |||| ||||| || |
Sbjct 920291 GCTCTTCCATTGGTGCTGGCTATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATT 920232
Query 66611 CCAATACCACC 66621
|||||||| ||
Sbjct 920231 CCAATACCGCC 920221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567820721680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |