Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4 493 5e-137 >seq4 Length=8946 Score = 493 bits (546), Expect = 5e-137 Identities = 429/519 (83%), Gaps = 14/519 (3%) Strand=Plus/Minus Query 172 AGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC 231 || ||||||||||||||||||||||| ||||| | |||||||| | | || | Sbjct 2447 AGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTG---GTATTTTGTATGT 2391 Query 232 CGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGG-CCAGCATCAGCTCGGGCGGTCGGA 290 | ||||| |||| |||| | | | || |||||||||| | | ||||| ||| Sbjct 2390 TACTCTCTCGGG-GGTGGCCTCTACAGTTTACCGGGCCAGCATCAGTTTGAGCGGTAGGA 2332 Query 291 TAAAGGCCCCGGGAATGTGGCCCC-CTTCGGGGG-GTGTTATAGCCCGGGGTGGAATGCG 348 ||| || | |||||||| | |||||| | ||||||||| | | | || | Sbjct 2331 TAAGTGCAAAGA-AATGTGGCACTGCTTCGGTAGTGTGTTATAGTCTTTGTCG--ATACT 2275 Query 349 GCCCGCCTGGACTGAGGTCCGCG-CTCCGGC-TAGGATGCTGGCGTAATGGTTGTAAGCG 406 ||| || | |||||||| | ||| || |||| ||||||| |||| ||||| | |||| Sbjct 2274 GCCAGCTTAGACTGAGGACTGCGGCTTCGGCCTAGGATGTTGGCATAATGATCTTAAGTC 2215 Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466 |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 2214 GCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAAC 2155 Query 467 CCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC-CCGTGAGG-GTGCACCATCGACCG 524 |||| ||||||||||||||||||| |||| ||| | || | ||| |||||| |||||||| Sbjct 2154 CCGTACGCGTAATGAAAGTGAACGTAGGTAGGACCTCCTTTAGGAGTGCACTATCGACCG 2095 Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2094 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 2035 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2034 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 1975 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||| ||||||||||||||||||| Sbjct 1974 GACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 1936 Score = 262 bits (290), Expect = 2e-67 Identities = 174/193 (90%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 2777 TGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 2718 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 2717 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 2658 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 2657 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 2598 Query 203 GCAACCAGACTTG 215 | | |||||||| Sbjct 2597 GAGATCAGACTTG 2585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999163450