Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq4 493 5e-137
>seq4
Length=8946
Score = 493 bits (546), Expect = 5e-137
Identities = 429/519 (83%), Gaps = 14/519 (3%)
Strand=Plus/Minus
Query 172 AGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC 231
|| ||||||||||||||||||||||| ||||| | |||||||| | | || |
Sbjct 2447 AGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTG---GTATTTTGTATGT 2391
Query 232 CGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGG-CCAGCATCAGCTCGGGCGGTCGGA 290
| ||||| |||| |||| | | | || |||||||||| | | ||||| |||
Sbjct 2390 TACTCTCTCGGG-GGTGGCCTCTACAGTTTACCGGGCCAGCATCAGTTTGAGCGGTAGGA 2332
Query 291 TAAAGGCCCCGGGAATGTGGCCCC-CTTCGGGGG-GTGTTATAGCCCGGGGTGGAATGCG 348
||| || | |||||||| | |||||| | ||||||||| | | | || |
Sbjct 2331 TAAGTGCAAAGA-AATGTGGCACTGCTTCGGTAGTGTGTTATAGTCTTTGTCG--ATACT 2275
Query 349 GCCCGCCTGGACTGAGGTCCGCG-CTCCGGC-TAGGATGCTGGCGTAATGGTTGTAAGCG 406
||| || | |||||||| | ||| || |||| ||||||| |||| ||||| | ||||
Sbjct 2274 GCCAGCTTAGACTGAGGACTGCGGCTTCGGCCTAGGATGTTGGCATAATGATCTTAAGTC 2215
Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 2214 GCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAAC 2155
Query 467 CCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC-CCGTGAGG-GTGCACCATCGACCG 524
|||| ||||||||||||||||||| |||| ||| | || | ||| |||||| ||||||||
Sbjct 2154 CCGTACGCGTAATGAAAGTGAACGTAGGTAGGACCTCCTTTAGGAGTGCACTATCGACCG 2095
Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2094 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 2035
Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2034 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 1975
Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||||||||||||||||| |||||||||||||||||||
Sbjct 1974 GACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 1936
Score = 262 bits (290), Expect = 2e-67
Identities = 174/193 (90%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct 2777 TGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 2718
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 2717 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 2658
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 2657 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 2598
Query 203 GCAACCAGACTTG 215
| | ||||||||
Sbjct 2597 GAGATCAGACTTG 2585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999163450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |