Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq39 140 3e-28
>seq39
Length=2831396
Score = 140 bits (154), Expect = 3e-28
Identities = 580/899 (65%), Gaps = 22/899 (2%)
Strand=Plus/Plus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || ||| | || || ||||||| || |||| || || || | ||
Sbjct 2633656 GAACCACTTTTGAAGGAAAACAAACGTCGTTATGTCATGTTTCCTATTAGATACCATGAA 2633715
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| ||||| ||||| || |||||||| | || || | |||||
Sbjct 2633716 ATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGATTTA 2633775
Query 61147 TCCAAAGACATGAATGACTGG-GAGCG---TTTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| | |||| ||| ||| | || | || | |||| |||||||
Sbjct 2633776 GGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGA-CAATGAAAGGTTTTTCATTGG 2633834
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA-- 61260
| | ||||| || || || || || || ||||| || ||||| || || |||||
Sbjct 2633835 AAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAAAA 2633894
Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| |||| || | || | ||| | | || || | || || || ||||| ||
Sbjct 2633895 CTTTTCT-GCTGAAGTT-CAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATG 2633952
Query 61321 ATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||| || | || || || | || || | || || || || || |||| ||| |
Sbjct 2633953 ATGGAAAACATTCATTCAGAAACTTATTCATTATTG--ATTGAAACTTATATCAAGGATC 2634010
Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438
|||| || || |||||||| || || || || || | || ||| |
Sbjct 2634011 CAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAGG 2634070
Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497
| ||||||||| ||| ||||| || | | | | | | |||| ||| ||||| |
Sbjct 2634071 CTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTG-TTTGCTGAGAGATTGGTT 2634129
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || |||||| | |||||||||||||||||||| | || || ||||||
Sbjct 2634130 GCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTG 2634189
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| | ||| | ||||| || ||||||| |||||| ||||| | || || ||
Sbjct 2634190 AAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGAA 2634249
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCC-GT 61675
|| | || ||||||||| ||| | || ||| || | || | || |
Sbjct 2634250 GGTTTACACACTGATTTTGCATGCTTGTTGTT----TGCTCATTTACAACATAGACCTGA 2634305
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
| | || ||| | ||| || ||| || || || ||| | ||||| | |
Sbjct 2634306 CCCA-AAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTA 2634364
Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795
|||| || ||||| || | | || ||||||||| | |||| || ||| |||
Sbjct 2634365 CTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTG 2634424
Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855
|||||||||||||| | | ||||| | |||||||| || | || ||| | |
Sbjct 2634425 AATTTGTTGCCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAGTTTACAATGTCACCA 2634484
Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914
| ||||||||||| ||||| | || || ||| ||| ||||| ||||| || || |||
Sbjct 2634485 ATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAAA 2634543
Score = 105 bits (116), Expect = 5e-18
Identities = 210/311 (68%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370
||||||||||| | | ||| | ||||||| | |||||| ||||| | | ||
Sbjct 922186 GACCAATCACCGCCGGACTTTACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAA 922127
Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430
|| | ||| | | || ||| || | || ||||| || | || || | | ||||
Sbjct 922126 AACAAATCCCTCGTACGAAACTCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCA 922067
Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490
|| | ||||||||||| || |||| |||||| ||||| | || | |||||| |||
Sbjct 922066 AACACATCGGCATGCCAAGGCTCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCA 922007
Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550
|||||||| || || || || |||||||| || || ||||| || || | ||
Sbjct 922006 CCTTGGTCAACATATCGGGCAGTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCT 921947
Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610
| | | |||||||||| | | || | || ||| | |||| |||| ||||| || |
Sbjct 921946 GCTCTTCCATTGGTGCTGGCTATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATT 921887
Query 66611 CCAATACCACC 66621
|||||||| ||
Sbjct 921886 CCAATACCGCC 921876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567811030960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |