Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq39 140 3e-28 >seq39 Length=2831396 Score = 140 bits (154), Expect = 3e-28 Identities = 580/899 (65%), Gaps = 22/899 (2%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || ||| | || || ||||||| || |||| || || || | || Sbjct 2633656 GAACCACTTTTGAAGGAAAACAAACGTCGTTATGTCATGTTTCCTATTAGATACCATGAA 2633715 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| ||||| || |||||||| | || || | ||||| Sbjct 2633716 ATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGATTTA 2633775 Query 61147 TCCAAAGACATGAATGACTGG-GAGCG---TTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| | |||| ||| ||| | || | || | |||| ||||||| Sbjct 2633776 GGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGA-CAATGAAAGGTTTTTCATTGG 2633834 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA-- 61260 | | ||||| || || || || || || ||||| || ||||| || || ||||| Sbjct 2633835 AAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAAAA 2633894 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | |||| || | || | ||| | | || || | || || || ||||| || Sbjct 2633895 CTTTTCT-GCTGAAGTT-CAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATG 2633952 Query 61321 ATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||| || | || || || | || || | || || || || || |||| ||| | Sbjct 2633953 ATGGAAAACATTCATTCAGAAACTTATTCATTATTG--ATTGAAACTTATATCAAGGATC 2634010 Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 |||| || || |||||||| || || || || || | || ||| | Sbjct 2634011 CAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAGG 2634070 Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 | ||||||||| ||| ||||| || | | | | | | |||| ||| ||||| | Sbjct 2634071 CTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTG-TTTGCTGAGAGATTGGTT 2634129 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | |||||||||||||||||||| | || || |||||| Sbjct 2634130 GCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTG 2634189 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| | ||| | ||||| || ||||||| |||||| ||||| | || || || Sbjct 2634190 AAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGAA 2634249 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCC-GT 61675 || | || ||||||||| ||| | || ||| || | || | || | Sbjct 2634250 GGTTTACACACTGATTTTGCATGCTTGTTGTT----TGCTCATTTACAACATAGACCTGA 2634305 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | | || ||| | ||| || ||| || || || ||| | ||||| | | Sbjct 2634306 CCCA-AAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTA 2634364 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| || ||||| || | | || ||||||||| | |||| || ||| ||| Sbjct 2634365 CTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTG 2634424 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 |||||||||||||| | | ||||| | |||||||| || | || ||| | | Sbjct 2634425 AATTTGTTGCCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAGTTTACAATGTCACCA 2634484 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 | ||||||||||| ||||| | || || ||| ||| ||||| ||||| || || ||| Sbjct 2634485 ATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAAA 2634543 Score = 105 bits (116), Expect = 5e-18 Identities = 210/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 ||||||||||| | | ||| | ||||||| | |||||| ||||| | | || Sbjct 922186 GACCAATCACCGCCGGACTTTACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAA 922127 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 || | ||| | | || ||| || | || ||||| || | || || | | |||| Sbjct 922126 AACAAATCCCTCGTACGAAACTCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCA 922067 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 || | ||||||||||| || |||| |||||| ||||| | || | |||||| ||| Sbjct 922066 AACACATCGGCATGCCAAGGCTCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCA 922007 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 |||||||| || || || || |||||||| || || ||||| || || | || Sbjct 922006 CCTTGGTCAACATATCGGGCAGTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCT 921947 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 | | | |||||||||| | | || | || ||| | |||| |||| ||||| || | Sbjct 921946 GCTCTTCCATTGGTGCTGGCTATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATT 921887 Query 66611 CCAATACCACC 66621 |||||||| || Sbjct 921886 CCAATACCGCC 921876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567811030960