Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq103 208 6e-49 >seq103 Length=904190 Score = 208 bits (230), Expect = 6e-49 Identities = 576/873 (66%), Gaps = 20/873 (2%) Strand=Plus/Minus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 ||||||||||| |||||||| ||| |||| | || ||||||| |||||||| || || Sbjct 562254 CGTCGTTTCGTTTTGTTCCCAATCAAGTACCACGAAATTTGGCAAATGTACAAGAAAGCC 562195 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 ||||| ||||||||||| | || || |||| ||| || || | | |||||| | Sbjct 562194 GAAGCGTCCTTCTGGACCGCCGAAGAAATCGACTTGGGTAAGGATACACAAGACTGGAA- 562136 Query 61171 CG-----TTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || || | | | | |||| | | |||||| | |||||||| ||||| | Sbjct 562135 CGAAAAATTGAACAA-CAATGAAAGATACTTCATTTCCAGAATCTTGGCGTTTTTTGCTG 562077 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 |||| |||||||| ||||| || || || | ||| |||| | || || ||| Sbjct 562076 CTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAATTTCTCTGCTGAAGTCCAAACCC 562017 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | || || |||||||| || ||||| || ||||| || | ||||| |||| | Sbjct 562016 CAGAAGCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCTGAGACTT 561957 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 || | || ||||| || ||||||| || | |||| || || || |||| Sbjct 561956 ACTCGTTACTTATCGACACTTACATCAAAGATCCAAAGGAAGCCGATTTCTTATTTAATG 561897 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC- 61464 | ||||| | || || | ||| ||| || || ||||| || | ||||||| | Sbjct 561896 CTATCGATAACATTCCTTGTATCAAGAAGAAGGCCGACTGGGCTTTAAGATGGATCAACG 561837 Query 61465 AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 | || ||| || |||||||||| |||| | || || || | ||||| ||| | || Sbjct 561836 ACGACGACG-CTTTATTTGGTGAAAGATTAGTTGCTTTCGCTGCTGTCGAAGGTATCTTC 561778 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 |||||||| ||||||||| | || || ||||||||||| | || | ||||| ||| | Sbjct 561777 TTCAGTGGTTCGTTTGCCTCCATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTTTA 561718 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 |||||| || || ||||||| || ||||| || | || ||||||||| ||| Sbjct 561717 ACCTTCTCTAACGAATTGATATGTCGTGACGAAGGTTTACACACTGATTTTGCGTGTTTA 561658 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA---GATTGTT 61701 | ||| | || | || | | | || | | | | ||| ||| || Sbjct 561657 TTGTTCTCTC---ATTTACAAAACAGAC---CAGATGCTGTTATTGTTGAAAGAATTATT 561604 Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATT-TCTGACTGACGCTTTGCCCGTCTCACTCAT 61760 ||| || || |||||| ||||||| | || | |||||||| || |||| | | Sbjct 561603 ACTGAAGCTGTTGAGATCGAAAAGGAATTCTTTGTC-GACGCTTTACCAATCTCCTTATT 561545 Query 61761 CGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGT 61820 || ||||| ||| |||||| || ||| ||||||||||||| || | | ||||| Sbjct 561544 AGGTATGAACTGTAACTTAATGTGTCAATATGTTGAATTTGTTGCTGATAGATTATTGGT 561485 Query 61821 CGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGAT 61880 | | |||| || | |||| || | |||||||| ||||||||||| | || Sbjct 561484 TGCGCTAGGTAACAAAAAGGTCTACAACGTCACTAACCCATTCGATTTCATGGAAAACAT 561425 Query 61881 TTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||| | | || ||||| || || ||||| || Sbjct 561424 TTCTTTAGCCGGTAAGACCAACTTCTTCGAAAA 561392 Score = 134 bits (148), Expect = 1e-26 Identities = 598/941 (64%), Gaps = 16/941 (2%) Strand=Plus/Plus Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066 ||||| ||| || | ||| || ||||| | || ||||| || | || || ||||| || Sbjct 448702 GGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCTC 448761 Query 66067 GGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCA 66126 |||| ||| | ||| | || || |||| |||||| |||| || || Sbjct 448762 ACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTACA 448821 Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTG 66186 |||||||| || | ||| | ||||| ||||| ||| ||| | || | ||| |||| Sbjct 448822 AGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGTA 448881 Query 66187 CCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC----TTTGCGTT--CGTAATG 66240 ||| | | ||||| | || || | ||||| ||| | || |||| | Sbjct 448882 CCATAATTTTTGAGCCTTAA---TA---ACAGATCTACCACGGTTTTCTTTTTCGTATTT 448935 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||| | | |||||| ||||| | || || || | || |||| | || ||| Sbjct 448936 GGAGTATAATTCTTCGAATTCATCACCATAGACATCTGATAAACCTGGAGCTTCGTTTGG 448995 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 | | | | | ||| ||||| | ||||| || | ||| |||| |||||| ||||| Sbjct 448996 AGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAATAAATCAGGAATCCA 449055 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 | ||| ||| | ||| | |||| | || || |||||||||| || | | || Sbjct 449056 TAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGATTCTTTCTGATATC 449115 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 | ||| || || || || |||||||| ||||||| ||| | || || | || | Sbjct 449116 TATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCT 449175 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 ||| |||||||| || || || |||||| ||||| || ||||| | ||| || | Sbjct 449176 CTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAAT 449235 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 || || ||||| | || ||||| ||| ||||| | || | || || | ||| Sbjct 449236 GATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTTGTG 449295 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGCCAC-TGTC 66658 || | | |||||| ||||| || |||| || || |||||| || | | |||| Sbjct 449296 AATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTC 449355 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | || ||||||||||||||| |||| || | | | | | || ||| | ||| Sbjct 449356 --GTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGT 449413 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || | || || | || || | ||| || | | |||| || ||||| | ||| Sbjct 449414 GGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGAC 449473 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 || ||||||| |||| ||| || || | || || || || || | ||| | Sbjct 449474 ATCATGTTGTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACT 449533 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898 | ||| | | | ||| || | |||| | | | | | ||||| || ||||| || Sbjct 449534 CTCATAATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATTCTCAACAAGTAAGAT 449593 Query 66899 CGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | ||||| ||||||| || ||||| |||||| ||||| Sbjct 449594 CTTTCCAAAGTCTTGAATCCGAAGTAGTTGTAATTAAAATC 449634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567064845520