Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq127 663 0.0 >seq127 Length=13859 Score = 663 bits (734), Expect = 0.0 Identities = 555/670 (83%), Gaps = 19/670 (3%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||| |||||||| ||||||||||||||||||||| |||| ||||||| Sbjct 2482 TGTAAAGTTCCTTCGAAGAGTCGAGATGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 2541 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||| ||||||||| ||||||| || ||| |||||| Sbjct 2542 TCCATCTAAAGCTAAATATTGGCGAGAGTCCGATAGCGAACAAGTACAGAGATGGAAAGA 2601 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||| |||||| ||| ||||||||||||||||||| |||| Sbjct 2602 TGAAAAGAACTTTGAAAAGAGAGAGAAAAAGTACGAGAAATTGTTGAAAGGGAAGGGCTT 2661 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | | |||||||| | | || | | |||| |||| |||| | | Sbjct 2662 GAGATCAGACTTG---GTATTTTGTATGTTACTTCTTCGGG-GGTGGCCTCTACAGTTTA 2717 Query 263 CAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGG 320 | || |||||||||| | ||||||| ||| || || || |||||||| | | |||| Sbjct 2718 CCGGGCCAGCATCAGTTTGGGCGGTAGGAGAATTGCGATGG-AATGTGGCACGGCCTCGG 2776 Query 321 GGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC------T 373 | ||||||||||| | | || | ||| |||| |||||||| | ||| | Sbjct 2777 TTGTGTGTTATAGCCTTCGTAG--ATACTGCCAGCCTAGACTGAGGACTGCGGGTTTATT 2834 Query 374 CCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433 | |||||||| |||| ||||| | |||| |||||||||| |||||||||||||||| Sbjct 2835 AC--CTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAG 2892 Query 434 TCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAG 493 |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct 2893 TCTAACGTCTATGCGAGTGTTTGGGTGTTAAACCCGTACGCGTAATGAAAGTGAACGTAG 2952 Query 494 GTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2953 GTGGGG-CCCGTATGGGTGCACCATCGACCGATCCTGATGTCTTCGGGTGGATTTGAGTA 3011 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 3012 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGTCTGAATAGGGTGAAGCCAGA 3071 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||| Sbjct 3072 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGGCGAATTTGGGT 3131 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 3132 ATAGGGGCGA 3141 Score = 663 bits (734), Expect = 0.0 Identities = 555/670 (83%), Gaps = 19/670 (3%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||| |||||||| ||||||||||||||||||||| |||| ||||||| Sbjct 10507 TGTAAAGTTCCTTCGAAGAGTCGAGATGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 10566 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||| ||||||||| ||||||| || ||| |||||| Sbjct 10567 TCCATCTAAAGCTAAATATTGGCGAGAGTCCGATAGCGAACAAGTACAGAGATGGAAAGA 10626 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||| |||||| ||| ||||||||||||||||||| |||| Sbjct 10627 TGAAAAGAACTTTGAAAAGAGAGAGAAAAAGTACGAGAAATTGTTGAAAGGGAAGGGCTT 10686 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | | |||||||| | | || | | |||| |||| |||| | | Sbjct 10687 GAGATCAGACTTG---GTATTTTGTATGTTACTTCTTCGGG-GGTGGCCTCTACAGTTTA 10742 Query 263 CAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGG 320 | || |||||||||| | ||||||| ||| || || || |||||||| | | |||| Sbjct 10743 CCGGGCCAGCATCAGTTTGGGCGGTAGGAGAATTGCGATGG-AATGTGGCACGGCCTCGG 10801 Query 321 GGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC------T 373 | ||||||||||| | | || | ||| |||| |||||||| | ||| | Sbjct 10802 TTGTGTGTTATAGCCTTCGTAG--ATACTGCCAGCCTAGACTGAGGACTGCGGGTTTATT 10859 Query 374 CCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433 | |||||||| |||| ||||| | |||| |||||||||| |||||||||||||||| Sbjct 10860 AC--CTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAG 10917 Query 434 TCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAG 493 |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct 10918 TCTAACGTCTATGCGAGTGTTTGGGTGTTAAACCCGTACGCGTAATGAAAGTGAACGTAG 10977 Query 494 GTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 10978 GTGGGG-CCCGTATGGGTGCACCATCGACCGATCCTGATGTCTTCGGGTGGATTTGAGTA 11036 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 11037 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGTCTGAATAGGGTGAAGCCAGA 11096 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||| Sbjct 11097 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGGCGAATTTGGGT 11156 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 11157 ATAGGGGCGA 11166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079989039050