Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq510 127 2e-24 seq154 96.9 3e-15 >seq510 Length=157725 Score = 127 bits (140), Expect = 2e-24 Identities = 565/891 (63%), Gaps = 8/891 (1%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| |||| |||| || ||||||| || |||| || || | || | || Sbjct 113975 GAACCATTATTAAAAGAAAACAAACGTCGTTATGTTATGTTTCCAATTAAATACCATGAA 114034 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| | || ||||| || ||||||||||| ||||| | || || || ||||| Sbjct 114035 ATTTGGAATTTTTATAAAAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAGTTGATTTA 114094 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT---GAACAACATTTCATTAAA 61203 ||||| || |||| ||| | | || | | | ||| | | || ||| Sbjct 114095 AGTAAAGATTTGGATGATTGGAACAATAAATTAACTGATAATGAAAGATACTTTATTTCT 114154 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || ||||| || ||||| || || || ||||| || ||||| |||||| | ||| | Sbjct 114155 AGAGTTTTGGCCTTTTTTGCTGCATCAGATGGTATAGTTAATGAAAATTTAGTTGAAAAT 114214 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 || | || || ||| || | || || | || || || || || ||| ||| Sbjct 114215 TTTTCTGCTGAAGTTCAACTGCCAGAAGCTAAATCATTTTATGGTTTTCAAATTATGATG 114274 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 || || | || || || ||||| | | | || || || || | | || | Sbjct 114275 GAAAACATTCATTCTGAAATGTATTCTTTATTGATTGAAACTTATGTTAAAGATCCACAA 114334 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 ||| ||| || || |||||||| || | || || | | ||||| ||| Sbjct 114335 GAAGCTGATTTCTTATTTAATGCCATTGAAAATATTCCATGTATTACCAAAAAAGCTGAT 114394 Query 61444 TGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502 |||||| | || |||||| | || || | ||| || || |||| ||||| | || || Sbjct 114395 TGGGCCATTAAATGGATC-CAAGATAAAGATGCTTTATATGCTGAAAGATTGGTTGCTTT 114453 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562 ||| | | || ||| | || || ||||| || ||||| | ||||||||||| || || Sbjct 114454 TGCTGCTATTGAAGGTATTTTCTTTAGTGGTTCATTTGCTTCTATCTTTTGGTTAAAAAA 114513 Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCAT 61622 | || | ||||| ||| |||| ||| |||||| || || | | || || || | Sbjct 114514 GAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGAATTAATTTGTAGAGATGAAGGTTT 114573 Query 61623 GCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGA 61682 ||| |||||||||| ||| ||||| | || | ||| | || || || Sbjct 114574 ACATACTGATTTTGCTTGTTTATTATTC---TCCCATTTACAAAATAGACCATCTCCAGA 114630 Query 61683 GCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGC 61742 ||| | | || || ||| || || || ||| | |||| | | ||||| || Sbjct 114631 AATTGTTGAAAAAATCATTGTTGAAGCTGTTGAAATTGAAAAAGAATATTTTACTGATGC 114690 Query 61743 TTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGT 61802 | | || || || | | || ||||||| | |||||| || ||| |||||| ||| Sbjct 114691 TCTTCCAGTTTCTTTATTAGGTATGAATTCTAATTTAATGTGTCAATATGTTGAATATGT 114750 Query 61803 TGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATT 61862 ||| || | | || | | |||||||| ||| | |||||| | || ||||| Sbjct 114751 TGCTGATAGATTATTATTTGCTTTGGGTAATAAGAAAGTTTATAATGTTACCAATCCATT 114810 Query 61863 TGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 |||||||||||| | || || ||| || || || || |||||||| || Sbjct 114811 TGATTTCATGGAAAATATCTCCTTGGCCGGTAAAACTAACTTTTTCGAAAA 114861 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 65383 CCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGCC 65442 ||| | |||||| || | | || || | ||||| | |||| | |||||| || || Sbjct 73740 CCAGATACCCAAGTCAACTAAATCTTTCAACAAGTATGGGTTGACAATTTGGAATTCACC 73681 Query 65443 GGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCC 65502 | || || | | | || |||||||| ||| ||||| || ||||| |||| || Sbjct 73680 AGCCAAGACTCTTCTGGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACC 73621 Query 65503 TAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCC 65562 | |||||| | |||||||||||||||||| ||||| |||||||| ||||||| ||| || Sbjct 73620 CAAAATTTGAGAAGTAGATGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACC 73561 >seq154 Length=15437 Score = 96.9 bits (106), Expect = 3e-15 Identities = 215/323 (67%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||| |||||| | |||||| | || || ||| | ||||||||| ||| || ||| Sbjct 12128 GGAGACATCAAAGTCCAATCCTCGTCAGCTTTTACTCTTTGCATAAATAAATCTGGAATC 12187 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || | | ||||| | ||| | | || | || ||| | || |||||||| | || Sbjct 12188 CATAAACCATAGAATAAATCTCTAGTTCTTAAATCTTCACTTCCATGATTTTTTCTCATA 12247 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || | | || || || || ||||||| ||||| | || || || || | || | Sbjct 12248 TCCAAAATTTCTAAAATATCACCATGCCAAGGTTCAACATAAATTGCAAATGCTCCGGGA 12307 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 ||||| || |||||||| || ||||| | || ||| ||||| ||||| ||||| || Sbjct 12308 CGTTTACCACCACCTTGATCAACGTATCTTGCAGTATTATTGAAAACACGTAACATTGGA 12367 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 || | || || || | |||||||| || | || || || | | ||||| Sbjct 12368 ACCAATCCATTTGAAGTTCCATTGGTACCAACAATATATGAACCAATGGATCTAATATCA 12427 Query 66599 TGAACATTCAGACCAATACCACC 66621 ||||||| | |||||||||||| Sbjct 12428 TGAACATGAATACCAATACCACC 12450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565524021040