Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8 264 2e-68 seq7 264 2e-68 >seq8 Length=5675 Score = 264 bits (292), Expect = 2e-68 Identities = 198/228 (87%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 2068 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2011 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| ||| |||| ||||| |||||||||| ||||| | ||| |||||||| Sbjct 2010 CTCGTTCAAGAGCAAGAATTACAATGCTCTATCCCCAGCACGACGGGGTTT-AAAGATTA 1952 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | ||| ||||| ||| ||||||| ||| | |||||||||||||||||||| Sbjct 1951 CCCAGGCCTCTCGGCGCAGGA---AGACTCGCTGACCCCGTCAGTGTAGCGCGCGTGCGG 1895 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 1894 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCGAACTTCC 1847 >seq7 Length=6709 Score = 264 bits (292), Expect = 2e-68 Identities = 198/228 (87%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 4310 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 4367 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| ||| |||| ||||| |||||||||| ||||| | ||| |||||||| Sbjct 4368 CTCGTTCAAGAGCAAGAATTACAATGCTCTATCCCCAGCACGACGGGGTTT-AAAGATTA 4426 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | ||| ||||| ||| ||||||| ||| | |||||||||||||||||||| Sbjct 4427 CCCAGGCCTCTCGGCGCAGGA---AGACTCGCTGACCCCGTCAGTGTAGCGCGCGTGCGG 4483 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 4484 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCGAACTTCC 4531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999890725