Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq8 304 2e-80 seq7 304 2e-80 >seq8 Length=5675 Score = 304 bits (336), Expect = 2e-80 Identities = 219/248 (88%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 82 GGACTATCGGCTCAA-GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 140 |||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1825 GGACTATCGGTAAAAAGCCGATGGAAGTTCGAGGCAATAACAGGTCTGTGATGCCCTTAG 1884 Query 141 ATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGG 200 | ||||||||||||||||||||||||||||| | | || ||||| | || || |||| Sbjct 1885 ACGTTCTGGGCCGCACGCGCGCTACACTGACGGGGTCAGCGAGT-CTTC--CTGCGCCGA 1941 Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260 ||| |||||||||||| ||||| | ||||||||||||||||||||||| |||| |||| Sbjct 1942 GAGGCCTGGGTAATCTT--TAAACCCCGTCGTGCTGGGGATAGAGCATTGTAATTCTTGC 1999 Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 |||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 2000 TCTTGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGC 2059 Query 321 CCTTTGTA 328 |||||||| Sbjct 2060 CCTTTGTA 2067 >seq7 Length=6709 Score = 304 bits (336), Expect = 2e-80 Identities = 219/248 (88%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 82 GGACTATCGGCTCAA-GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 140 |||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4553 GGACTATCGGTAAAAAGCCGATGGAAGTTCGAGGCAATAACAGGTCTGTGATGCCCTTAG 4494 Query 141 ATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGG 200 | ||||||||||||||||||||||||||||| | | || ||||| | || || |||| Sbjct 4493 ACGTTCTGGGCCGCACGCGCGCTACACTGACGGGGTCAGCGAGT-CTTC--CTGCGCCGA 4437 Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260 ||| |||||||||||| ||||| | ||||||||||||||||||||||| |||| |||| Sbjct 4436 GAGGCCTGGGTAATCTT--TAAACCCCGTCGTGCTGGGGATAGAGCATTGTAATTCTTGC 4379 Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 |||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 4378 TCTTGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGC 4319 Query 321 CCTTTGTA 328 |||||||| Sbjct 4318 CCTTTGTA 4311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199857920