Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 250 2e-61 seq4 147 2e-30 >seq1 Length=2842153 Score = 250 bits (276), Expect = 2e-61 Identities = 1196/1882 (64%), Gaps = 48/1882 (3%) Strand=Plus/Minus Query 65080 GACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTT 65139 ||| ||||||||||| || ||| || |||| ||| | || |||||||| || ||||| Sbjct 872093 GACAGTGAACTGGATGGCGGCAGCGGCAGCCTGGGTACGCAGGTAGTACATACCAGTCTT 872034 Query 65140 GAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGG--CT 65195 ||||| |||| ||||||| |||||||| | | || || | || || | || Sbjct 872033 AAGGCCCTTCTTCCAACCATAGAAGTGCATCGAGG-TGATCTTACCCATGGTTGGAGACT 871975 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | | || || |||| ||||| ||| || | ||| ||| | || || |||| Sbjct 871974 TG---AGGTGGATGTTCATCGACTCGGACTGGTCAACGTAGGCACCTCTGTCGGCGGCCA 871918 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 |||| ||||| | | || |||||||| ||||||||||| | | | | | || Sbjct 871917 TGTCGATGATTCCCTTTTGGGAGATCTCCCACACGGTCTTGTAGAT-CTTCTTGAGTTCG 871859 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACC---ACGACGTGCAATAATGCGATTACGC 65371 ||||| | || || ||||| ||||| | || || || ||| || | Sbjct 871858 TCTGGAACGTTAGGAAGGTGCTGGATCGAACCGTTATCAC-TG--ATGATGTAGTTCTTC 871802 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || | || ||| | || | |||| | | | | || || | | |||| || Sbjct 871801 ATAGCATCGTCCCAGATTCCAAGGTCGACCAAGTCACGGAGCATGTAAGGGTTGACGATC 871742 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| |||| || || | ||| ||||||||||| ||| || || ||| | Sbjct 871741 TGGAACTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGGCTCGAAGCAC 871682 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||| || | || |||| || || ||||||||||| ||||| ||||| | ||| Sbjct 871681 TCGTTGTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCACCAAGAGCGAG 871622 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTT 65609 |||| | |||| || | | || || ||| || ||||||| ||||| |||||| Sbjct 871621 TTTCTAAGTCCGGTCTTGGCGATCTTAGCCTTCAACTCATCCCAGTCCCACAGATCGGTT 871562 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 | | || | ||||| ||| | |||| | | || | ||| || || | Sbjct 871561 -------GGCTTCTT-GCCCCACAGATCGTACTGCAAGATACCCTTGGAGGCTGGCGAGC 871510 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTT--GAC--AGCTGGTCTCGAGT 65725 | | | | |||||||| || ||||| |||| | | ||| ||| ||| | Sbjct 871509 CCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAACTCGGACGAAGC----CTCCAAA 871454 Query 65726 GCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785 || || || ||||||||||| || | ||| | ||||| ||||| | ||| Sbjct 871453 GCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTCACGGGCCTCTGGGGAGTCG 871394 Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 | |||| || ||||| ||||||||||||| |||||| || || | | | | || Sbjct 871393 AATGGCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTGCACACCGAGAGCAACAGGT 871334 Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 | | | || || ||||| | ||||| || || |||||||| || || || | Sbjct 871333 CTGTTTCTCATGTTAGAACGGCGAGCCTCTGGAACTGGGTAGTAGTTCCGGTCAATGACA 871274 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGT 65965 | ||||| || || || | || | | ||| | |||| | || || | || Sbjct 871273 CAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCAACTTCTCAAAGTTGTAAG-- 871216 Query 65966 TTAGGACGATCGGGAG----TGCCGGACACCACAAACT-TGGGAAGGGCAAGAGATGCGA 66020 |||| ||| | | || | | | ||||| ||| ||| | | || || | Sbjct 871215 --AGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCAAGCAGACG-GAAGCCA 871159 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTAC 66080 ||| ||||| || | || || |||| || ||||| |||| || ||||| || Sbjct 871158 AGTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCTCACAGCACAAGTTG- 871100 Query 66081 TGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTA 66138 | || | ||||| |||| ||||| || || |||||| ||||| || |||||||| Sbjct 871099 -GAAGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAGCGTCCTTGTA 871041 Query 66139 CATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCG 66198 | |||| | ||||| || ||||| |||| ||| | |||| || ||| || | Sbjct 871040 GACCATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACCACAGCTTCTG 870981 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258 ||||| | |||||| | | || | ||| ||||| |||||||| ||||||| Sbjct 870980 GGCCTTGATGGTACGTCTTCCACGTCCCTCGCGCTCGTATCTCTCGTAGAGACGTTCGAA 870921 Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318 || || | || ||||| |||| ||| || |||| | | || | ||| Sbjct 870920 CTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGAAGAGAGTCCACGT 870861 Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378 | || ||||| ||| || || ||||| ||||| ||||| ||| | || Sbjct 870860 GGAGTTGGCCTCGACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCTGGGAACAAGTC 870801 Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438 || || || |||||| | ||||| ||||| || | |||| || || |||||||| Sbjct 870800 ACGGGCACGGATCTCCTCCTTACCGTGGTTTTTACGGATGTCGGTGAGGTCGAAGATGTC 870741 Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498 || |||||||| || ||||||||||||| | || | ||| ||||||||||| Sbjct 870740 AGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCTTGGTC 870681 Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558 ||||| || || |||||||||||||| | ||| || | || ||||| || | || Sbjct 870680 CACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAAGTACC 870621 Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618 ||||| ||| | ||| || || || || || | ||| | | || ||| || || Sbjct 870620 GTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCGATTCC 870561 Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGA 66678 |||||| ||||| |||||| |||||| | || || | | || || || ||||| Sbjct 870560 ACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCGATGGA 870501 Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738 ||| |||| |||| | | | |||| || | ||| || || || |||| Sbjct 870500 GTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCGGCGTT 870441 Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798 ||| || || || | ||||||||| |||||| | |||||| ||||| ||||||| Sbjct 870440 GAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTCTCGAG 870381 Query 66799 GACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGG 66858 ||| |||||||| || || | || | ||| || ||| | | || ||||| Sbjct 870380 GACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCTCATGATCATGTGCTGAGG 870321 Query 66859 CCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918 | ||| | | | | | || || | ||| || || ||||||||||||| || Sbjct 870320 TCTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTCTTGAATCC 870261 Query 66919 AAAGTACGAGTAATTGAAATCG 66940 |||||| ||| | ||| ||| Sbjct 870260 AAAGTAGTTGTACTGGAAGTCG 870239 >seq4 Length=1514682 Score = 147 bits (162), Expect = 2e-30 Identities = 380/571 (67%), Gaps = 15/571 (3%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| |||| || || ||| |||||||| ||||| || || || |||| Sbjct 729290 TGTTCCCTATCAAGTACAGCGACATCTGGGAGATGTACAAGAAGGCCGAGGCCTCTTTCT 729231 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGC----GTTTATCG 61179 |||| |||||| |||| ||||| || || ||| |||||| | ||| | || Sbjct 729230 GGACCACCGAGGAGATCGACTTGTCTAAGGATCTGATCGACTGGAACACCAAGTTGAACG 729171 Query 61180 AGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATC 61239 | || | | ||||| | |||| | || ||||| |||||||| ||||||||| Sbjct 729170 C-CAACGAGAGATACTTCATCTCGCGTGTGCTCGCATTCTTCGCCGCTTCCGACGGTATC 729112 Query 61240 GTCAATGAGAATTTATTG--GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTT 61297 ||| | ||||| || | |||| ||| | ||||| || || | ||||| ||| Sbjct 729111 GTCGACGAGAACTTGTGCCAGAAC--TTCACTACTGAGGTTCAGATGCCAGAGGCCCGTG 729054 Query 61298 GTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCA 61357 ||||||||||||||||| ||||||| ||||||| |||| ||| || || | Sbjct 729053 CCTTCTACGGCTTCCAGATCATGGTGGAGAACATCCACTCCGAGACTTACTCCGTGCTGA 728994 Query 61358 TCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAATGCCATCGAGACG 61416 |||| || ||||||| || | | | | ||| | ||||| | |||||||||| Sbjct 728993 TCGACACCTACATCACCGA-CAAAAGCGAGGCCAACTACTTGTTTGAGGCCATCGAGAAC 728935 Query 61417 ATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT 61476 || || | | ||| ||| || |||||| ||| ||||| || |||| | | Sbjct 728934 ATCCCACCTATCAAGGAGAAGGCCCTCTGGGCCGTCAGATGGAT--GGAGAACAAGGACG 728877 Query 61477 ACATTT--GGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGAT 61534 | ||| | ||| || || | || | || | |||| ||| | || ||| |||| Sbjct 728876 CCCTTTACGCTGAGCGTCTGATCGCCTACGCTGCCATCGAAGGTATCTTCTTCTCAGGAT 728817 Query 61535 CGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCA 61594 |||| || | ||||| ||| | ||||| | || || ||||| ||||| |||||| || Sbjct 728816 CGTTCGCTTCGATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCAGGTCTCACCTTCTCCA 728757 Query 61595 ATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | ||| | || | | || |||||| |||| Sbjct 728756 ACGAGCTCATCTGCAGAGATGAGGGCTTGCA 728726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567927319600