Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 1e-21
seq2 95.1 5e-14
>seq4
Length=1514682
Score = 120 bits (132), Expect = 1e-21
Identities = 281/418 (67%), Gaps = 6/418 (1%)
Strand=Plus/Minus
Query 12631 GTCTTTGGTATCT--GGAACGTGCAAGGTTACAAAGTCGGAACGAGACAAGAGACCTTGC 12688
|||| ||| | || ||||||||||| || || || ||||| | ||||||| | |
Sbjct 16222 GTCTCTGGCAACTCCGGAACGTGCAATGTGACGAAATCGGAGTTGGCCAAGAGATCGTCG 16163
Query 12689 AGAGTAGACACTTG-CTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGAA 12747
|| || || || ||| | ||| || |||| | | | || |||||||| |||
Sbjct 16162 AGGGTCTCGACCTGTCTTGCCGTT-CCGAGAGACATGATGCTCAGCACATCGTAGTAGAG 16104
Query 12748 AACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACC 12807
||| | ||| || ||| |||| || || ||||| | ||| |||||||||| || |||||
Sbjct 16103 AACGTGCATTCCGAGAGACTCGGCCAGCACAGACAACTGCGAACCAATGTGTCCGTAACC 16044
Query 12808 TACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGTCTTGTTCCAAAT 12867
|| ||||| || ||||| || | ||||| | ||||| ||| |||| ||||| |
Sbjct 16043 GACAATACCCAGAGTCTTACCACGGACTTCCCAGCAACGCGAAGACTTCTTATTCCAGGT 15984
Query 12868 GCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGTCC 12927
||| ||||| | || ||| || || | ||| ||||| || | || | | |
Sbjct 15983 GCCCTGGTGCATCTCCAACGATCTGTCACCCATCTGGCGAGACAGCGTGATGACCTCGGC 15924
Query 12928 TATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGCC 12987
| | | | ||| || ||| ||| | ||| | || ||||| || || || ||||| ||
Sbjct 15923 GAGGGTCATCTCAGCGACGGATCTCGAATTGGAGAATGGAGAGTTGAACACGGCAATTCC 15864
Query 12988 TAGTTTGGTAGCCATGTCTAGATTAACCT-GATCGTAACCAATGCAGAAGCATCCTAT 13044
| |||| ||| || |||| |||| | |||| ||||| |||||||| || ||
Sbjct 15863 GTGCTTGGCAGCGTACTCGAGATCGACCTGGTTCGT-TCCAATACAGAAGCAACCGAT 15807
>seq2
Length=2777425
Score = 95.1 bits (104), Expect = 5e-14
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489
|||||||| || ||||| || | |||||||||||||| || ||||| | || || ||
Sbjct 601563 GTCATACGCGAAGGAATACAGTGCGGGTTGATGATGATATCCGGCACGACACCCTCCGCA 601504
Query 364490 GTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548
|| || |||||||||||| || || | | | | ||| ||||| ||||| || | | ||
Sbjct 601503 GTGAATGGCATATCTTCGTGGCGGTAAG-TCATACCGATGGTACCCTTCTGTCCGTGACG 601445
Query 364549 AGAAGCAAACTTGTCGCCAAT 364569
||| ||||||||||| || ||
Sbjct 601444 AGAGGCAAACTTGTCACCGAT 601424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884886037748395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |