Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq339 286 5e-75
>seq339
Length=19946
Score = 286 bits (316), Expect = 5e-75
Identities = 204/229 (89%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 3378 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 3321
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| |||||||| ||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 3320 CTCGTTGAAGAGCAACAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 3261
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 3260 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 3202
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3201 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3153
Score = 286 bits (316), Expect = 5e-75
Identities = 204/229 (89%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 14053 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 13996
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| |||||||| ||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 13995 CTCGTTGAAGAGCAACAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 13936
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 13935 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 13877
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 13876 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 13828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751997326405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |