Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq339 286 5e-75 >seq339 Length=19946 Score = 286 bits (316), Expect = 5e-75 Identities = 204/229 (89%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 3378 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 3321 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| |||||||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 3320 CTCGTTGAAGAGCAACAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 3261 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct 3260 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 3202 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 3201 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3153 Score = 286 bits (316), Expect = 5e-75 Identities = 204/229 (89%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 14053 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 13996 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| |||||||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 13995 CTCGTTGAAGAGCAACAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 13936 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct 13935 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 13877 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 13876 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 13828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751997326405