Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq339 381 1e-103
>seq339
Length=19946
Score = 381 bits (422), Expect = 1e-103
Identities = 242/260 (93%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13149 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 13208
Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGAC 178
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 13209 TATATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGAC 13268
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
| |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||
Sbjct 13269 CATCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAAT 13328
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 13329 TCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTACCAAGGACGTTTTCATTAAT 13388
Query 299 CAGTGAACGAAAGTTAGGGG 318
|| ||||||||||||||||
Sbjct 13389 CA-AGAACGAAAGTTAGGGG 13407
Score = 369 bits (408), Expect = 7e-100
Identities = 242/262 (92%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 60 GGGGAGCCAGGACTTTT-ACTTTGAAAAAA-TTAGAGTGTTCAAAGCAGGCCTTTGCTCG 117
|| || ||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 2471 GGCGAACCAGGACTTTTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCG 2530
Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGG 176
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2531 AATATATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGG 2590
Query 177 ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAA 236
||| |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct 2591 ACCATCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAA 2650
Query 237 ATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTA 296
||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct 2651 ATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTACCAAGGACGTTTTCATTA 2710
Query 297 ATCAGTGAACGAAAGTTAGGGG 318
|||| ||||||||||||||||
Sbjct 2711 ATCA-AGAACGAAAGTTAGGGG 2731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915196641216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |